Camelina sativa (false flax): 104746990
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Entry
104746990 CDS
T05044
Name
(RefSeq) DNA mismatch repair protein MSH7 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
csat
Camelina sativa (false flax)
Pathway
csat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104746990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104746990
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104746990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
104746990
NCBI-ProteinID:
XP_010466856
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Position
15:complement(16798331..16804539)
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AA seq
1116 aa
AA seq
DB search
MQRQRSILSFFQKPSPASTKGLVSGDATSGGGGGGGGGKSRITVKEGDGKGDASVRVPVS
KSVDEVRGTDTPPEKIPRRVLPSGFKPAESAARGGASSLFTNIMHKFVKVDDRDCSGARQ
ARSREHVVPCDDSSVCVKKDDKVFPEFRSNNGQSQERGHAFSFSGRADIRPVEDDDVPGP
ETPGMRPSVSRLKRVLEDGMTSKENKLPVLDSSKRLKLLQDPVCGEKKEVNEGTKFEWLE
PSRIRDANRRRPDDPLYDRKTLYIPPDVFKKMSASQKQYWSVKREYMDIVLFFKVGKFYE
LYELDAELGHKELDWKMTMSGVGKCRQVGISESGIDEAVQKLLARGYKVGRIEQLETSDQ
AKARGANTIIPRKLVQVLTPSTACEGNIGPDAVHLLAIKEIKMELEKCSTVYGFAFVDCA
ALRFWVGSISDDASCAALGALLMQVSPKEVVYDSKGLSREAQKALRKYTLTGSTAVQLAP
VPQVMGDTDAAGVRNIIESNGYFKASSESWNGAVDGLNECDVALSALGELINHLSRLKLE
DVLKHGDIFPYQVYRGCLRIDGQTMVNLEIFNNSCDGGPSGTLYKYLDNCVSPTGKRLLR
NWICHPLKDVVSINKRLDVVEEFTANSEVIEITGQYLRKLPDLERLLGRIKSSVQSSAYV
FPALLGKKVLKQRVKAFGQIVKGFRSGIDLLLALQKESNMMILLCKLCKLPVLVGKSGLE
LFLSQFEAAIDSDFPNYQNQDMTEENAETLTVLFELFIERATQWSEVIHTISCLDVLRSF
AVTASLSAGSMARPVIFPDSNQNQEIKGPILKIQGLWHPFAVAADGQLPVPNDILLGEAR
NSSNSIHPRSLLLTGPNMGGKSTLLRATCLAVIFAQLGCYVPCETCELSLVDTIFTRLGA
SDRIMTGESTFLVECTETASVLQNATQNSLVILDELGRGTSTFDGYAIAYSVFRHLVEKV
QCRMLFATHYHPLTKEFASHPRVTSKHMACAFKSRSDQEPRGCDQDLVFLYRLTEGACPE
SYGLQVALMAGIPNQVVETASDAAQAMKRSIGENFKSSELRSEFSSLHEEWLKTLVGISR
TAHNDNTIVEDDHDTLVCLWHELKSSYCLPQVKAIT
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtcagagatcgattttgtctttctttcaaaaaccctcgccggcgagtactaag
ggtttggtttccggcgatgctactagcggcggaggaggaggaggaggaggaggaaaatca
cgaattactgtgaaggaaggggatggtaaaggcgacgcttcggtacgcgttcctgtatcg
aaatctgtggatgaggttagaggaacggatactccgccggagaagattccgcgtcgtgtc
ttgccgtccggatttaagccggctgaatccgccgccagaggtggagcttcgtcgctgttc
actaatattatgcataagtttgtgaaggtcgatgatcgagattgttctggagcaaggcag
gccaggagccgagaacatgttgttccgtgtgatgattcgtccgtatgtgtgaagaaggat
gacaaagtttttcctgaatttcgttccaataatggtcagtctcaagaaagaggccatgct
tttagcttcagtgggagagctgatataagaccagtagaagatgatgatgttcctggtcca
gaaacaccagggatgcgtccaagtgtttctcgtttgaagcgagttttggaggatggaatg
acttctaaggagaataagctccctgtattggattctagcaaaaggctgaaattgcttcaa
gatccagtttgtggagagaagaaagaagtaaacgaaggaaccaaatttgaatggcttgag
ccttctcgtatcagggacgctaacagacgacgtcctgatgatccactttatgacaggaag
accctatacataccacctgatgttttcaagaaaatgtctgcatcgcaaaagcaatattgg
agtgtcaagagggaatatatggatattgtcctgttctttaaagtgggaaaattttatgag
ctgtatgagctagatgcagaattaggtcacaaagagcttgactggaagatgaccatgagc
ggtgtcggaaaatgcagacaggttggtatctctgaaagtgggatagatgaggcagtgcaa
aagctattagctcgtggatataaagttggacgaattgagcagctagaaacttcggaccaa
gcaaaagccagaggtgctaatactataattccaaggaagctagttcaggtattaactcca
tcaacagcatgcgagggtaacatcgggcctgatgccgtccatcttcttgctataaaagag
atcaaaatggagctagaaaagtgttcaactgtgtatggatttgcttttgttgactgtgct
gccttgaggttttgggttgggtccatcagcgatgatgcatcgtgtgctgctcttggagct
ttattgatgcaggtttctccaaaggaagtggtatatgacagtaaagggctatcaagagaa
gcccaaaaggctctacggaaatatacattgacagggtctacggcggtacagttggctcca
gtaccacaagtgatgggagacacggatgctgctggagttagaaatataatagaatctaac
ggatactttaaagcttcttctgaatcatggaacggtgctgttgatggtctaaatgaatgt
gatgttgcccttagtgcccttggagagctaattaatcatctgtctaggctaaagctggaa
gatgtacttaagcatggggatatttttccgtaccaagtttacaggggctgtcttagaatt
gatggccaaacgatggtaaatcttgagatatttaacaatagctgtgatggtggtccttca
gggaccttgtacaaatatcttgataactgtgttagcccaactggtaagcggctcttaagg
aattggatctgccatccacttaaagatgtagtaagcatcaataaacggcttgatgtagtt
gaagagttcacagcaaactcagaagttattgaaatcactggccagtatctccgtaaactt
ccagatttagaaagactcctcggacgcattaagtctagcgttcaatcatcagcctatgtt
ttccctgctcttctggggaaaaaagtgctgaaacaacgagttaaagcatttgggcaaatt
gtgaaagggttcagaagtggaattgatttgttgttggctctacagaaggaatcaaatatg
atgattttgctttgtaaactctgtaaacttcctgtattagttggaaaaagtgggctagag
ctattcctttctcaattcgaagcagccatagatagcgactttccaaattatcagaaccaa
gatatgacagaggagaatgctgaaactctgacagtactttttgaattatttatcgaaaga
gccacccaatggtctgaggtcattcacaccataagctgcctagatgtcctgagatctttt
gcagtcactgcaagtctctctgctggaagcatggcccgacctgttatatttcctgattca
aatcagaatcaagaaataaaagggccaatacttaaaatccaaggactatggcatccattt
gcagttgcagctgatggtcaattgcctgttccaaatgatatactccttggtgaggctaga
aacagcagcaacagcattcatcctcggtcgttgttactgacaggacctaacatgggtgga
aaatcaactcttctgcgtgcaacatgtcttgccgttatctttgcccaacttggttgttat
gtgccttgtgagacatgtgaactctcccttgtggatactattttcacaaggcttggcgct
tctgatagaatcatgactggagagagtaccttcttggtagaatgcactgagacagcgtca
gttcttcagaatgcaactcagaattcactagtaatccttgacgaactgggcagaggaact
agtactttcgatggatacgccattgcatactcggtttttcgtcacctggtagagaaagtc
caatgccggatgctctttgcaacgcattaccaccctctcaccaaggaattcgcgtctcac
ccacgtgtcacctcaaaacacatggcttgcgcattcaaatcaagatctgatcaagaacca
cgtggctgtgaccaagacctagtgttcttgtaccgtttaacggagggagcttgtcctgag
agctacggacttcaagtagccctcatggctggaataccaaaccaagttgttgagacagca
tcggacgctgctcaagccatgaagagatcaattggggaaaacttcaagtcaagtgagcta
aggtctgagttctcaagtctgcatgaagaatggctcaagacattggtgggtatctctcga
actgcccacaacgacaacaccattgtcgaagatgaccatgacacgttggtttgcttatgg
catgagctaaaatcctcttactgtcttcctcaagtgaaggcgataacctaa
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