Camelina sativa (false flax): 104747224
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Entry
104747224 CDS
T05044
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03030
DNA replication
csat03420
Nucleotide excision repair
csat03430
Mismatch repair
csat03440
Homologous recombination
csat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104747224
03420 Nucleotide excision repair
104747224
03430 Mismatch repair
104747224
03440 Homologous recombination
104747224
03460 Fanconi anemia pathway
104747224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104747224
03032 DNA replication proteins [BR:
csat03032
]
104747224
03400 DNA repair and recombination proteins [BR:
csat03400
]
104747224
Transcription factors [BR:
csat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104747224
DNA replication proteins [BR:
csat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104747224
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104747224
MMR (mismatch excision repair)
104747224
DSBR (double strand breaks repair)
HR (homologous recombination)
104747224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
104747224
NCBI-ProteinID:
XP_010467125
UniProt:
A0ABM0W890
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All DBs
Position
15:19696608..19699751
Genome browser
AA seq
640 aa
AA seq
DB search
MPVSLTPNAIKAINAGDVNLKPLLQVLDIKMIGRSQERSQERYRFLISDGVSAQHAMVAV
QLNDRVKSGHVDKGSIVQLIDYICSDVKGRKVIVVLNMETIVPHSETVGNPTIFGETDTE
TQKTLSAAGNIQPPNRVGFNEPTVQHSVNKAPPRGINFHNPANSTSSFRPSVQPSYQPPA
SYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLL
DSDGGEIRVTCFNAVVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTV
ELCPDEDGSIPRQQFSFRPIGDIEDAENNTILDVIGVVTSVNPSVPILRKNGMETHRRIL
NLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSASHPVLAIKAGKVSDFSGKSVGTISSTQ
LFINPDFPEAHKLRNWFDHGGKDTASFSISRDTMPGGSSRNEIRKSVSQIKEEGLGRSEK
PDWITVKATVSFIKTDSFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRY
LLQVQIQDHTGLTWVTAFQETGEEIMGCPAKKLYALKYELEKEEEFAEIVRDRLFHQYML
KLKIKEESYGDEQRVKMTVVKVDAVNYTSESKFLLGLLVR
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgagtttgactccgaacgcaatcaaggcgataaacgccggcgacgtcaatttg
aagccgttgttgcaggttttagatatcaaaatgatagggagaagccaagagagaagccag
gagaggtatcgtttcctcatttcagatggtgtttcagctcaacatgctatggtcgcggtt
cagcttaatgatcgggtcaagtctggacatgttgataaaggatctatcgttcagcttatt
gattacatttgcagcgatgtcaaaggccgcaaggttattgtggtgctgaacatggagaca
atagtaccacattctgagacagtcgggaaccccacaatatttggagaaacagatacagaa
acccaaaagacgctttcagctgcaggcaatatacaacctccgaatagggttggttttaat
gaaccaacggttcagcattcagttaataaagcacctcccagaggcataaactttcataat
ccagccaacagtacttcaagtttcaggccatctgttcaaccttcatatcaaccgcctgca
agctacagaaatcatgggcccataatgaagaacgaggctccagctcgagtcatccctatt
gctgctctcaatccataccaaggtcggtgggctataaaggctagagtaactgcgaaagga
gatatccgacgatataacaatgcaaaaggagatggaaaagttttctcatttgatctgctt
gactctgatggaggggagattcgggttacctgctttaatgctgttgttgaccgattctat
gatgtcactgaggttgggaaggtatatttgatttcaaagggaagtttgaagcctgcacag
aaaaatttcaaccacttaaagaatgaatgggaaattttcttggagtcaacatcgactgtg
gagctttgccctgatgaagatggctccataccaaggcaacagttctccttccgtcctata
ggtgacattgaggacgctgagaataataccatactcgatgtgattggggttgtgacttct
gtgaacccctcagtgccaatcttgagaaagaatgggatggaaacccataggagaatcctg
aatctgaaggatgaatcgggaaaagctgtagaggtaacattatggggagaattctgtaac
cgagatggtcggcaacttgaagagatggttgattcagcctctcacccggttttagctatc
aaagctggaaaagtaagcgacttcagtgggaagtctgtggggacaatctcttcaacacag
ctcttcataaatccagatttccctgaagcccataaactgaggaactggttcgatcacgga
ggaaaagatactgcatccttctccatttctagagataccatgcctggaggaagttcaagg
aatgagataagaaaaagtgtttctcagatcaaagaggaaggccttggaagatcagagaag
cctgactggatcactgtgaaagcaactgtatcattcatcaaaacagatagcttctgttac
acagcttgccctttgatgattggagataaacaatgcaacaaaaaggtgacacggtctgga
acaaacaggtggctctgtgaccggtgcaaccaagagtctgatgaatgcgactacagatac
ctgcttcaggtgcagatacaagaccacactgggttgacttgggtaactgcgtttcaagaa
acgggagaagaaatcatgggatgtccggctaagaagctttacgcattgaaatacgaacta
gagaaggaggaagaatttgcagagattgttagagacagactgtttcatcagtatatgtta
aagctgaagatcaaagaggaatcgtatggggatgaacaaagagttaagatgacagtggtg
aaggtagatgcggtgaattatacatccgaaagtaaattcttgcttggtttgctcgtaagg
taa
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