Camelina sativa (false flax): 104747400
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Entry
104747400 CDS
T05044
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic-like
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104747400
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104747400
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
HAT_Syf1_CNRKL1_N
DUF4522
Motif
Other DBs
NCBI-GeneID:
104747400
NCBI-ProteinID:
XP_010467329
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Position
15:complement(23943202..23947206)
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AA seq
815 aa
AA seq
DB search
MIVTGACDFSSSLSVASSSSSSAIAVSPFNVSSLSSNPKFINSSSTLFRSLSLSLIHHRS
SYSRRSLRRLSSSHKINGNKTHFFPKSSPRTPPLFTANSTAQRTGTFVEHLTGITESEEG
NSESNDFGDVESARNDIRNVATRRVETEFEVRELEELPEEWRRSKLAWLCKEVPSHKSVT
LVRLLNAQKKWVRQEDATYIAVHCMRIRENETGFRVYRWMTQQNWYRFDFGLATKLADFL
GKERKFTKCREVFDDILNQGRVPRESTFHILVVAYLSSSVEGCLEEACSVYNRMIQLGGY
QPRLSLHNSLFRALLSKQGGGSLDGHLKQAEFIFHNVVTTGLEVQKDIYSGLIWLHSCQD
EVDKARINSLREEMKKAGFQESKEVVVSLLRAYAKEGGVEEVERTWLELLNLDCGIPSQA
FVYKMEAYSKVGDFAKALEIFREMEKHLGGATVTGYHKIVEVLCKFQQVEYAESLLKEFV
ESGKKPLLPSYIEIAKMYFDLGLHEKLEMAFVECLEKCQPSQTIYNIYLDSLVKIGNLEK
AGDVFDAMKNNGTINVNARSCNTLLKGYLDSGKQVRAERVYDLMRLKKYEIEPPLMEKVD
YILSLKRKEVKRPLSMKLSKEQREVLVGLLLGGLQIESDKEKKSHMIKFEFRENSQAHLI
LRQHIHDQFREWLHPLSDFQEDIIPFEFYSISHSFFGFYADHFWPKGQPEIPKLIHRWLS
PHSLAYWYMYSGFRTSQGDIILRLKGSLEGVEKVVKALRGKSMMCRVKKKGKVFWIGLQG
TNSALFWNLIGPHVLEDLKDHLKPASESMDFESCC
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcaccggagcttgcgacttctcttcatcactctccgtcgcctcttcctcctcc
tcctccgccatcgccgtctcacccttcaacgtttcatctctctcctctaaccccaaattc
atcaattccagctcaactctcttccgttccctttccctctcccttatccaccatcgcagc
agctactcacgccgctctctccgccgtctctcctcctctcataaaattaatgggaacaaa
acccatttcttccccaagtcctctccgcggactccaccacttttcacagctaattccaca
gctcaacgaaccgggactttcgtcgaacaccttacaggcattacagaatcggaagaagga
aacagtgaatccaacgatttcggtgatgtggagtctgcaaggaacgacattagaaacgtt
gcgacccgtagagtggaaacggagtttgaagtgagagaattggaagagttgccggaggag
tggcgacggtctaagcttgcgtggctgtgtaaagaggttccatcgcataaatccgtgacg
cttgtgaggctcttgaatgctcagaagaaatgggttcgtcaagaagatgctacttacatc
gctgttcactgtatgcggattcgtgagaacgagactggattcagggtgtatagatggatg
acacagcagaattggtacaggtttgattttgggttagccaccaaattagctgatttcttg
gggaaagaacgaaaatttacgaaatgccgagaggtgttcgacgatattttgaatcaaggg
cgtgttcctagagagtcaacatttcatattcttgtagttgcgtatctaagtagctcagta
gaaggctgtctcgaagaagcgtgtagcgtttacaacagaatgattcagcttggagggtac
caaccgcgtcttagtctacataattctttatttagagctctcttgagcaaacaaggagga
gggtctttggatggtcaccttaagcaagctgagtttatctttcacaatgttgtgacaaca
gggcttgaggttcagaaggatatctatagtggattaatctggctgcatagttgtcaagac
gaagttgacaaagctaggataaattctttgagagaagagatgaagaaggctggttttcag
gaaagtaaagaagttgtggtgtcgttactgagagcatatgcgaaagagggaggtgtggaa
gaagttgagaggacatggcttgaattgcttaatctagactgcggtataccttctcaagcg
tttgtgtacaaaatggaagcttattcaaaagttggcgattttgcaaaagctctggagata
tttagggagatggagaagcatctaggtggtgcaactgttactggataccacaaaatcgtt
gaggttctatgtaagttccagcaggtggaatatgcagaatctctcttaaaagagtttgta
gaaagcgggaagaagccgctcttaccctcatacatcgagatagccaaaatgtacttcgat
ttaggtttacatgagaagttggagatggcttttgttgagtgcttggagaaatgtcaacct
agccagaccatatataacatatacttggattcactggttaagatcggcaaccttgagaaa
gcaggggatgtctttgatgcgatgaagaacaacgggacaatcaatgtgaatgctagatca
tgcaacacccttttaaagggatacctagattctggtaaacaagtgcgggcagagagagtt
tatgatctgatgagattgaagaaatacgaaatcgaaccaccgctcatggaaaaggttgat
tacatcctgagcttgaagagaaaagaggtgaagagaccgttgagcatgaagctaagcaaa
gagcaacgtgaggtattggtaggtttgctgttaggtggcttgcaaatcgaatcagacaaa
gagaagaagagccacatgatcaaatttgaattcagagagaattctcaggctcatctgatt
ctgagacaacacatacatgaccagttccgcgagtggttgcatcctttgagcgactttcag
gaggatattataccgttcgagttctactccatttctcattcattctttgggttttacgct
gatcatttctggccaaagggccagccagagattccaaaactgattcaccggtggctctca
ccacactcacttgcttactggtacatgtacagcggctttagaacatcgcaaggtgacatt
atcttgagattgaagggaagtctagaaggtgttgagaaggtagtaaaggctctgagaggc
aaatctatgatgtgtcgggttaagaagaaaggaaaagtcttctggatcggacttcaggga
acaaactcggctttgttctggaatctaatagggccacacgtattggaggacttgaaagat
catttgaaacctgcttctgaatcaatggactttgaatcatgctgttga
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