Camelina sativa (false flax): 104747435
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Entry
104747435 CDS
T05044
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104747435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104747435
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104747435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
104747435
NCBI-ProteinID:
XP_010467367
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All DBs
Position
15:24372113..24376636
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AA seq
941 aa
AA seq
DB search
MEILHSDQAYSNGYYKNVRKRKLNQVDDGVHVGSVTPEAKRVKSSSKVIDYSQPFAVSNM
LEALEGGRFGSVTKELQEIADLRMELVKQCIWLYPSLADTEFGGGKNQTIELENQQVVEA
DVINLDDDDDDDTDVSSKALCVVPSSDIVNLDSDDEGCVSPRPKYQFQSSLVLHQMNQGD
VTPVTPQLNFEEVNLGRGLEMSSAIKRIEMPSAFNGMEMPSAIKRIEMPSAFKGMEMPSA
IEDMVEGQTSTDKVLSIENGMVNDKGVYVGVEEDDSDNESKSGDEDLGDIWNEMAMSIVC
SKDVAGETSQKEPKADVVEDCEHSFILKDDMGSVCRVCGVIEKSILDIIDVQFTKAKRNT
RTYASETRNKRFGESDVELKLSEEGLMIGGLSAHQLHANKMKPHQVEGFQFLCSNLVADD
PGGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKPLVVLPKGILSTWKREFVRWQVEDIPL
LDFYSAKADNRAQQLAILKQWLERKSILFLGYKQFSTIVCDDSSSDSRSCQEILLKAPSI
LILDEGHTPRNEDTNIVQSLAQVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLDTS
KSVVKRILSRAPSGVKGRLTGNSNSDMASVFNETVEHTLQKCEDFKVKIAVIQDLREMTK
KVLHYYKGDFLDELPGLADFTVVLNLSPRQLNEVKKLRHEKRKFKVAAVGSAIYLHPKLK
VFSDKSDNVGDDTMDKMLEKLDVNEGVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLE
RLAAVAKGWKEGREVFVLTGENKSEDRERSMENFNNSPDAKIFFGSIKACGEGISLVGAS
RILILDVPLNPSVTRQAIGRAFRPGQKKMVHAYRLIAGSSPEEEDHNTCFKKEVISKMWF
EWNEYCGYRNFEVETIDVDEAGDKFLESPALREDIRVLYKR
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggagattctccactccgatcaagcttactctaacgggtactataagaatgtgcgtaaa
aggaagctgaatcaagttgatgatggagtccatgttgggtctgttacacctgaagcaaag
cgggttaagagctcatccaaagttattgattattctcagccatttgctgttagcaacatg
cttgaagctttagaaggtggtagatttgggagtgttacgaaagagctacaagagatagct
gatctgaggatggaattggttaagcaatgtatctggttatacccatctctagcggatact
gaatttggaggaggtaagaatcagacgattgagttggaaaatcaacaggttgtggaagcc
gatgtcatcaatttagatgatgatgatgatgatgatactgatgtttcaagtaaagctctc
tgtgtggttccttcatccgatattgtgaatcttgattctgatgatgagggctgcgtgagt
ccgaggcctaagtatcagtttcagtcaagtcttgtgctgcatcagatgaatcaaggggat
gtgacaccagtaacaccgcaactcaatttcgaggaggtcaatttagggaggggcttggag
atgtcttctgccatcaagcgcattgagatgccttctgccttcaatggcatggagatgcct
tctgccatcaagcgcattgagatgccttctgccttcaagggcatggagatgccttctgcc
atcgaggacatggtggagggacaaacaagtacagacaaagttctttccatagaaaatggt
atggttaatgataaaggtgtctacgtgggcgttgaggaggatgacagtgataatgagtct
aaatcaggagatgaggatcttggtgatatctggaatgaaatggccatgtcaatagtgtgt
tccaaggatgtagccggggagacttcacaaaaggaaccaaaggcagatgtagtggaagac
tgtgaacactcgtttattctaaaggacgatatgggttctgtttgccgtgtctgtggagtt
attgagaaaagtatattagatataatcgatgtgcaattcactaaagcaaaaaggaacacg
agaacatatgcttctgaaaccaggaataaaagatttggtgagtctgatgttgaacttaag
ttatctgaagaagggctgatgataggtggactgtctgctcatcaactgcatgctaacaaa
atgaagcctcaccaagttgagggattccagttcctttgcagcaatttagtggcagacgat
cctggtggttgtatcatggctcatgctccaggttctggaaaaaccttcatgattatcagt
tttatgcagagctttcttgcaaagtatcctcaggctaagccactggttgtacttccgaag
ggaattctgtctacttggaaaagagagttcgtgagatggcaagttgaggacataccgctg
cttgatttctatagtgctaaagcagataaccgtgcacagcagctggctattttaaaacag
tggttggagaggaagagtatcttatttctcgggtacaagcagttctcaactattgtgtgt
gatgattcaagtagcgattcacgctcttgccaggagatattgctcaaagcaccttcgatc
ctcattttggatgaaggacacactccaaggaatgaagacactaatatagtgcagtccctt
gcgcaagtccaaacaccaagaaaagttgtcctctcaggaacgctttatcagaaccatgta
aaggaggttttcaacattctcaaccttgttcgacccaagtttctcaaattggatacctcc
aaatctgttgtgaagaggatattgagtcgtgctccatctggtgtcaaggggagacttact
ggaaacagcaattcagacatggcttcggtgttcaatgaaactgtggaacacaccctgcag
aagtgcgaggatttcaaggtgaaaattgccgtaatccaagatttgcgggagatgaccaag
aaggtgcttcattactataaaggagatttcttagatgagcttcctggacttgctgatttc
actgtggttcttaatctgtctccaaggcagttgaacgaagtgaagaagttaaggcatgag
aagagaaaatttaaggttgctgctgtgggaagtgcaatttaccttcacccgaagctgaaa
gttttctctgacaagtctgataatgtcggtgatgatactatggacaaaatgctagagaag
ctagatgtgaatgaaggcgtcaaagcaaagttcttccttaacttgataaacctgtgcgac
tcagctggtgaaaagctcttggtgttcagccagtatctcattccactgaagtttcttgaa
agactagctgctgtagctaagggatggaaagaagggagagaagtttttgttcttacaggc
gagaacaaatctgaggatcgtgagcgttcaatggaaaattttaacaattcgccagacgcc
aaaatcttctttggttcgataaaagcatgtggagaaggtatttcgcttgttggagcatct
cgcatactaatattggatgttccgctgaacccttctgtgacccgccaagctattgggcga
gcgtttcgacctggacaaaagaagatggtgcatgcatacagattgattgctgggtcatca
cctgaggaagaggatcacaacacttgcttcaaaaaggaagttatctcaaagatgtggttc
gagtggaacgagtactgcggctaccgaaactttgaggtagagactatcgatgtggatgaa
gctggtgataagttccttgaaagtcctgccttaagagaagacataagagttctctacaaa
aggtaa
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