Camelina sativa (false flax): 104747473
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Entry
104747473 CDS
T05044
Name
(RefSeq) WD-40 repeat-containing protein MSI2
KO
K10752
histone-binding protein RBBP4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
csat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104747473
03083 Polycomb repressive complex
104747473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104747473
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104747473
Histone modification proteins
HAT complexes
HATB complex
104747473
HDAC complexes
Sin3A-HDAC complex
104747473
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104747473
PRC2.2
104747473
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104747473
Heterochromatin formation proteins
Other heterochromatin formation proteins
104747473
Chromatin remodeling factors
NuRD complex
104747473
NuRF complex
104747473
NuRF complex (fruit fly)
104747473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
EIF3I
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_DCAF4
eIF2A
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
DUF4989
Motif
Other DBs
NCBI-GeneID:
104747473
NCBI-ProteinID:
XP_010467407
UniProt:
A0ABM0W8X9
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Position
15:complement(24896806..24898969)
Genome browser
AA seq
416 aa
AA seq
DB search
MADEGKEETGMEQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVNWVPSPPSPYAADPYF
GVHKLILGTHTSGDSQDFLMVADVVTPTPNGEPGLRGANQDPVIPKVEIRQKIRVDGEVN
RARCMPQKPTLVGAKTSGCEVFLFNYAKHAEKPQTSECDPDLRLVGHDKEGYGLSWSPFK
EGYLLSGSQDKKICLWDVSATPQDKVLNAMFVYEGHESAVADVSWHMKNENLFGSAGEDG
RLIIWDTRTNQMQHQVKVHEKEVNYLSFNSFNEWILATASSDSTVALFDLRKLNAPLHVL
SSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHG
GHKAKISDFAWNEKEPWVLASVAEDNSLQVWQMAESIYRDDEDAEADINEDFTHQS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaaggtaaagaggagacgggaatggaacaagtggaggaagatttctctgtg
tggaagaagaacacaccatttctctacgatcttttgatctctcacccactcgaatggcca
tctctcaccgtcaattgggttccatctccgcccagtccttacgcggctgacccttacttc
ggcgtccacaagcttatactcggaactcatacttccggtgactctcaagatttcctcatg
gtcgccgacgtcgttactccgacaccaaacggtgaacctggtttgcgcggcgctaatcag
gatcctgtcattcctaaggtggagataaggcagaagatacgtgttgatggagaagtgaac
agagcgcgatgcatgcctcaaaagcctacgcttgtgggtgcaaagacaagtgggtgtgag
gtgtttctgtttaattacgccaaacatgctgaaaagccacaaacgagtgagtgtgatcct
gatctgaggttagtgggacatgacaaggaagggtatggattgtcttggagtcctttcaag
gagggttatcttctgagtggttcacaggataagaagatctgtctttgggatgtttcagct
acaccgcaagataaggttttgaatgcaatgtttgtgtatgagggacatgaaagtgctgtt
gcagatgtatcatggcacatgaagaatgagaacctttttgggtctgcgggtgaggatggt
cgattgataatatgggacacacggacaaaccaaatgcaacaccaagtgaaagtacatgaa
aaagaggtgaactatctgtctttcaattcattcaatgaatggattttagccacagcttcc
tcagattctactgttgccttgtttgacctccgcaagctgaatgcaccattgcatgtcttg
agcagccacgagggagaggttttccaagtggagtgggatcctaaccatgagacagtactc
gcatcttctggggaggacagaaggctgatggtctgggacctgaacagggttggagaagag
cagcttgagatagagttggacgcagaagatggtccaccagagttactcttctctcatgga
ggccacaaggcgaagatatcagactttgcttggaacgaaaaggagccttgggtccttgca
agtgtagccgaagacaacagtcttcaggtctggcagatggcggaaagcatctatcgcgac
gatgaggatgctgaggccgacatcaacgaagattttacacaccagtcctga
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