Camelina sativa (false flax): 104747481
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Entry
104747481 CDS
T05044
Name
(RefSeq) pre-mRNA-splicing factor syf2 isoform X2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104747481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104747481
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19-related factors
104747481
Complex C
104747481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
104747481
NCBI-ProteinID:
XP_010467416
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All DBs
Position
15:complement(24958416..24961950)
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AA seq
306 aa
AA seq
DB search
MVNARRVHPDCINASNPYHECVEFCFKKIAEVKARLEKENAGLAEAVGGSGHPNREQGRD
SLDDKRIEEDSSEEEEEEEDNQEPEVDVSQLTGRKKKLFELRLKMNEARKSNQTDVGSEK
KKMEAPTETKGISKQKWLEERKKKIGKLLDANGLDLTKAYMLDTQEAAESKYKKWEKEPT
PAGWDVFNQKTLYNAYKKRTKNIKVDLEEYNRMRAADPEFYREASSLQYGKAPKTSQDKI
DKMAKELFDREQKRQEFSRRRKFREEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLER
GTALPD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgcgagaagagtgcatccggattgtataaatgcttcgaatccttatcacgag
tgtgtcgagttttgctttaagaaaattgctgaagtgaaggcaagattggagaaggagaat
gcaggattagctgaagctgtcggtgggagtggtcaccctaatcgtgagcaagggagggat
tcgctcgatgataaaagaatagaggaagatagttctgaagaagaagaggaggaagaggat
aaccaagaacctgaagtagacgtgagccaacttactggtaggaagaagaagttgtttgag
ttgagacttaagatgaatgaagctagaaaatccaatcagacggatgtcgggagtgaaaag
aagaaaatggaagcaccaacagagacgaaaggaatctcaaaacagaaatggttggaggag
aggaagaaaaagattgggaaacttctcgatgccaatggtttagatctgacaaaggcttat
atgcttgatactcaagaagcagcagaatcaaagtacaaaaaatgggaaaaggaacctacg
cctgctggttgggatgtctttaaccagaagacgttatacaacgcatataagaaacggaca
aagaacattaaggttgatctagaggagtataacagaatgagagcagctgatccagagttt
taccgtgaggcgtcaagcttgcaatatgggaaggctccaaaaacttcgcaagataagata
gacaagatggcaaaagagctcttcgacagagaacaaaagcgacaagagtttagcaggagg
agaaagttccgggaagagaaggatatcgattccatcaacgacagaaacgagcatttcaac
aagaagatcgagcgtgcgtttgggaaatacacgttggagatcaaaaacaacttggagcga
ggaactgcgttacccgactaa
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