Camelina sativa (false flax): 104747611
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Entry
104747611 CDS
T05044
Name
(RefSeq) vacuolar protein sorting-associated protein 35A isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
csat
Camelina sativa (false flax)
Pathway
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104747611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104747611
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
104747611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
HlyD_2
Motif
Other DBs
NCBI-GeneID:
104747611
NCBI-ProteinID:
XP_010467577
LinkDB
All DBs
Position
15:26608704..26614833
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AA seq
787 aa
AA seq
DB search
MIADGAEDEEKWLAAGAAAFKQNAFYMQRAIDSNNLKDALKYSAQMLSELRTSKLSPHKY
YDLYMRAFDELRKLEIFFMEETRRGCSVIELYELVQHAGNILPRLYLLCTAGSVYIKTKE
APAKEILKDLVEMCRGIQHPLRGLFLRSYLAQISRDKLPDIGSEYEGDADTVTDAVEFVL
LNFTEMNKLWVRMQHQGPARDKERREKERGELRDLVGKNLHVLSQLEGVDLDMYRDTVLP
RVLEQIVNCRDEIAQYYLIDCIIQVFPDEYHLQTLDVLLGACPQLQPSVDIMTVLSRLME
RLSNYAALNAEVLPYFLQVEAFSKLNNAIGKVIEAQEDMPILSAVTLYSSLLKFTLHVHP
DRLDYADQVLGSCVKQLSGKGKINDTRATREIVSLLSAPLEKYNDVVIALKLTNYPLVVE
YLDNETKRIMATVIIRSIMKNNTLITTAEKVEALLELIKGLINDLDEPQGLEVDEDDFEE
EQNSVARLVHMLYNDDTEEMFKIISILKKHFLTGGPKRLKFTIPPLVVSTLKLIRRLPVE
GDNPFGKEASVTATKIFQFLNQIIEALPNVPSPDLAFRLYLQCAEAANKCDEEPIAYEFF
TQAYILYEEEISDSKAQVTALQLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWLEDHETIQDGDRVLLCLKRALKIANSAQQMGSNGQGSAGSVTLFIEILN
KYLYFYEKGIPQITVESVESLIQLIKNEESMPSDPYAESLFASTLQFMEFQKQKGGAIGD
RYEEIKV
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcagacggagcagaagatgaagagaagtggctcgccgccggtgctgctgctttc
aagcaaaacgcattctacatgcaacgcgctattgactcgaataatctgaaagatgctctc
aagtattcggctcagatgctcagcgagttacggacttcgaagctatcacctcacaagtac
tatgatctctatatgcgagcttttgatgagttgaggaaacttgaaattttcttcatggaa
gaaactcggcgtggctgctcggtcattgaactctatgagctggttcagcatgctggtaac
atattaccacgtttgtatctcctatgtacagcaggatccgtttatatcaaaaccaaggaa
gctcctgccaaagaaattcttaaggatcttgttgagatgtgtcgtgggattcagcatcct
ctacgtggtctcttcttgagaagttaccttgcgcaaattagtcgagataaattacctgac
attggttctgagtatgaaggagatgctgatacagtcacagatgcagtggagtttgtacta
ttgaactttactgagatgaataaactctgggtcagaatgcaacatcagggacctgctcga
gacaaggagagacgggagaaagagaggggcgagcttcgtgaccttgttggaaagaacctt
cacgtgctgagtcagttagaaggtgtggaccttgatatgtacagagatacagttcttcct
agagtcttagagcagatagtgaactgcagagatgagattgcccaatattacctaatagac
tgcatcattcaagtttttcctgacgagtatcacttgcagactctagatgtacttcttggg
gcttgtccacaactgcagccatcagttgacatcatgacagtgctttcacgtttaatggag
aggctgtcaaattatgctgctttaaatgctgaagtattaccttacttcctgcaagttgaa
gctttctcaaagttgaataatgcaattggaaaggtgatagaagcacaagaagacatgcct
attttgagtgcagtaaccctatattcctcccttctcaagtttactcttcatgttcaccct
gatcggcttgattatgcggaccaagtgttgggatcatgtgttaagcaactgtccggaaaa
ggaaagattaatgacactcgtgcaacaagggagattgtctcgcttttaagtgctccccta
gagaagtataatgatgttgtcatcgcccttaaattaacaaactatccccttgtagtggag
taccttgataacgaaacaaagagaataatggctactgttataattcgaagcattatgaaa
aacaatactcttattactacagcagagaaggttgaagcactgcttgaactaattaaagga
cttatcaacgatttggatgagccgcaaggtcttgaggttgatgaagatgattttgaggaa
gagcagaattctgtcgcgcgtctcgttcacatgttatataatgatgacacggaagagatg
tttaagataatcagtatcctgaagaagcatttcctaacaggagggccaaagcgcttaaag
tttaccattcctccccttgttgtttctactctaaagctaatcaggcgattgccagtggaa
ggagacaatccttttggaaaagaggcttctgttactgctactaaaatattccaatttcta
aatcagattattgaagcactacctaatgttccatcacctgacttggcattccggttgtac
ttgcaatgtgctgaggccgcgaataagtgtgatgaagaacctattgcatacgaatttttc
acccaggcatacatcttatacgaagaagaaatttcagactcaaaggcccaagtgactgcg
ttacaacttataattggaactctgcaaaggatgcacgtatttggtgttgagaatagagat
actttaacacacaaggctacggggtattcagcgaaacttctaaagaaacctgaccaatgt
cgagctgtttatgcatgttctcatctattctggcttgaagatcatgagaccatacaagat
ggagacagggttctgctttgtctcaaacgagcgcttaaaattgcaaattcggctcaacaa
atgggtagcaatggtcagggtagtgcaggatctgttaccctcttcatcgagatactaaac
aagtatctttatttctatgagaaagggattccacagataacagttgaatcagtggagagc
ctgatccaactgatcaagaacgaagaatcaatgccatctgatccatatgctgaatcgttg
tttgcaagtacgcttcagttcatggagtttcaaaagcagaaaggcggtgccattggtgac
agatacgaggagatcaaagtatag
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