Camelina sativa (false flax): 104747707
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Entry
104747707 CDS
T05044
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 4-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00900
Terpenoid backbone biosynthesis
csat01100
Metabolic pathways
csat01110
Biosynthesis of secondary metabolites
Module
csat_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
104747707
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csat01006
]
104747707
Enzymes [BR:
csat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
104747707
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
104747707
2.5.1.29 geranylgeranyl diphosphate synthase
104747707
Prenyltransferases [BR:
csat01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
104747707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
YggL_50S_bp
Motif
Other DBs
NCBI-GeneID:
104747707
NCBI-ProteinID:
XP_010467692
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All DBs
Position
15:complement(27545849..27547446)
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AA seq
377 aa
AA seq
DB search
MLIKMEAQTILLYLLLFFLSLHFVFTTLKPWLSPAKTRWLIRLLHLPIKSPAAATVFARK
DVREFLDSSIQLENKEEDSFGFDFDFRTYMISKAESINRALDEAIPLIEPLNIHNAMRYA
VLAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKP
TTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVRAVKELAKSIGTKGLVAGQAKDL
SSEGLDQNDVGLEDLEFIHVHKTGSLLEASAVIGAVIGGGSEEEIEKVRSFARCIGLLFQ
VVDDILDETKSSEELGKTAGKDQIAGKLTYPKVIGLEKSKEFVKKLKRDAREHLQGFDSD
KVKPLIALTNFIANRNN
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcaaaatggaagctcaaaccattcttctttatcttttactcttctttttatct
ctacacttcgtgtttacaactctaaaaccatggctgagccccgcgaaaacgcggtggctg
atccgtctcctccacctcccgatcaagtctccggcagccgccactgtttttgccagaaaa
gacgtccgtgagtttcttgattcatcaatccaactggaaaacaaagaagaagactctttc
ggttttgatttcgatttcagaacgtacatgatcagcaaagcagagtcaataaacagagca
ttagacgaagccattccactcatcgagccactcaacatccataacgcaatgcgttacgcg
gttctcgccggcgggaaacgcgtcagaccaatactatgcctcgcggcttgcgagctagtg
ggcggggaagagcgtttagcgattcaagcggcttgtgcggttgagatgattcacacaatg
tcactcatcaaagatgatcttccttgtatggacaatgacgatctccgacgaggtaaacca
actacacacaaagtattcggagaaagcgtggccatcctctccggcggcgcacttttagcc
ctagctttcgagcatttgaccgaagctgacgtgtcatccaagaaaatggttagggccgtt
aaagaattggctaagtctattggaacgaaaggactcgtggcgggacaagctaaggatttg
agcagtgaagggttggatcaaaacgacgttggtttagaggatcttgagtttattcacgtt
cataaaaccggttcgttgctcgaagcgtcggcggttatcggagcggttattggtggtggt
tcagaggaagagattgagaaagtgagaagctttgcgaggtgtattggattgttgtttcag
gtggttgatgatattttggatgagactaagtcgtcggaggaattaggaaaaaccgccgga
aaagatcagatcgccggtaagctgacgtatccgaaagtgattggtctagagaaatcgaag
gagtttgtgaagaagttgaagagagatgcgagagaacatcttcaagggtttgattcggac
aaagtgaaacctttgattgctcttaccaacttcattgccaacagaaacaactga
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