Camelina sativa (false flax): 104747725
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Entry
104747725 CDS
T05044
Name
(RefSeq) protein CHROMATIN REMODELING 8 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104747725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104747725
03400 DNA repair and recombination proteins [BR:
csat03400
]
104747725
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104747725
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
104747725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
104747725
NCBI-ProteinID:
XP_019092865
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All DBs
Position
15:27669654..27674680
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AA seq
1178 aa
AA seq
DB search
MEEDEDQFLLSSLGVTSANPEDLEQTILDEATKKLDHDEGGSVEEQSIKKKLEGSSQNEL
LNKLRAVKFEIDAVASTVEHVDEVADENGLLQKDGGDESDVQGLHSGSVLQHALATDRLK
SLKRRKVQLEEEFAALHGQSASTSSADRDNLLRELVKEKTKKKPSLKRKLIETRKPSRRD
GKKVKVVSFHEDTDFDAIFQAASTGFVETERDELVRKGILTPFHKLDGFERRLQQPGPSN
SRNLPEGDHENEDSGSIDRAVQSMSLAAKARPTTKLLDAQDLPKLEPNPAPFRRLRKLYK
THDYSDNEVKKSKARKKSKKKRPLPESKWRKRISREDSSLQESEDGGRILATSSCEEEDL
DDLDDADENETSSIQLEGGLNIPQCIFRNLFEYQRVGVQWLWELHCQRAGGIIGDEMGLG
KTVQVLSFLGSLHFSKMYKPSIIICPVTLLRQWRREAQKWYPDFHVELLHDSAKDSGNGK
GQGKASESDYDSECSVDSDHEQKKSKNTKKWDSLINRVLNSESGLLITTYEQLRLQGEKL
LNIEWGYAVLDEGHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPG
KLGVLPVFEAEFSVPITVGGYANASPLQVSTAYRCAVVLRDMIMPYLLRRMKADVNAHLT
KKTEHVLFCSLTVEQRSTYRAFLASSEVEDIFDGNKNSLYGIDVMRKICNHPDLLEREHS
HQNPDYGNPERSGKMKVAAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMD
GLTPVKQRMALIDEFNNSDDVFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARE
RAWRIGQKKDVTIYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKDLFI
LKDDGDSNASTETSNIFSQLAEEINIVGVQSDNTAEGSSEQADVDTTDKTGEAMDEETNI
LKSLFDAHGIHSAVNHDAIINANDEEEKMRLEHQASQVARRAAEALRQSRMLRSRESISV
PTWTGRSGCAGAPSSVRRRFGSTVNSRLTQTGDKPSVIKNGISAGLSSGKAPTAAELLNR
IRGSREQAIGVGNESSLPSSSGSSSRVGSLQPEILIRQICSFVQRKGGSADTTSIVNHFR
DSVSCDDKPLFKNLLREIATLEKNQNRSVWVLKSEYKD
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacgaggatcagtttttgttgagtagcttaggtgtgacttcggctaatcct
gaagatttagaacagacgatactcgatgaggcaacgaagaaactagatcacgatgaaggt
gggagtgtggaggagcagtctatcaagaagaagcttgaaggaagcagccagaacgagctt
ttgaataaactgagggctgtaaagtttgagattgatgcagttgcttcaactgttgagcat
gtggatgaggttgcggatgaaaatggcttattacagaaagatggtggtgatgaatcagat
gttcaggggttgcatagtggttctgtactacagcatgctcttgccacagaccgtcttaaa
agtcttaagaggagaaaagttcaactagaagaagaatttgctgctctacatggtcagagt
gcgtctactagtagtgctgatcgagataatcttctgcgagaattggtgaaggagaagacg
aagaagaagcctagtctcaagaggaaattgatagagactcggaaaccaagcagaagagat
gggaagaaggtgaaagtagtctcctttcatgaggacacggattttgatgctattttccaa
gcagcttcaacaggttttgttgaaacggaaagagatgaattggtgaggaaaggaatttta
actccgtttcacaagcttgatggttttgaacgccgacttcaacaacctggaccgtcaaac
tcgcgcaacctacctgaaggagaccacgaaaatgaggactctggaagtattgatagagct
gtccaatcaatgtcgctggctgcaaaggctcgccctacaaccaagctacttgatgcacaa
gacttgccaaagcttgaaccaaaccctgctccttttagaaggctaagaaagctttacaag
actcatgattattcggataatgaagtaaaaaaaagtaaagctaggaagaagagcaaaaag
aagcggcctttgcctgaaagtaaatggcgaaagcgaatatctcgtgaagactctagtctt
caagaaagtgaagatggagggagaatcttggccacttccagttgtgaggaagaagaccta
gatgatcttgatgatgcagatgaaaacgaaacatcttctatacagcttgaaggtggatta
aacattcctcaatgcatatttcgtaatcttttcgaataccaaagagtaggggtgcaatgg
ctttgggaacttcactgccaaagggctggtggcattatcggggacgagatgggtcttggt
aagactgtgcaggtcttatcttttcttggatccttgcatttcagtaagatgtacaaacca
agtattatcatatgccctgttacgctattgcgtcaatggagaagagaagcacagaaatgg
tatccagattttcacgtggaactactccatgactcagcaaaagattctgggaatggcaaa
ggacaaggcaaggcctctgaaagcgattacgacagtgagtgttcagtcgatagtgatcat
gagcaaaaaaagtccaagaacaccaagaaatgggattctttgataaaccgggttctaaat
tctgagtcggggctcctcatcaccacatatgagcaattgaggctgcagggtgagaagctg
ctcaatattgaatggggttatgcagtattggacgaaggccatcggatccggaacccaaat
tctgatattactttggtgtgcaaacagttacagaccgtccatcgaataattatgactggg
gcaccaatccagaataaactaacagaactctggtccttgttcgattttgttttcccggga
aaactgggtgtcctgcccgtgtttgaagcagagttttctgttcccataacagtgggtggc
tatgccaatgcttctcccttacaagtgtcgactgcctataggtgtgctgttgttcttcgt
gatatgatcatgccgtacctcctccgccgcatgaaggccgatgtgaacgcacatcttaca
aaaaagacggaacacgttctcttttgcagcctcactgtggagcagcgatctacctacagg
gcgttccttgcgagctccgaagtagaagatatttttgatggcaacaaaaattcgctttat
gggattgatgtgatgcgtaagatatgcaaccaccctgatctacttgagagagaacattct
caccagaacccagattatgggaatccagaacgcagtgggaagatgaaggttgctgcagaa
gtgcttaaggtctggaaacagcaaggacaccgtgtacttctgttttcacagactcagcaa
atgctggacatcctcgagagcttcttggttgcaaacgagtatagttaccggaggatggat
ggtcttacaccagtgaaacagagaatggctttaattgatgagtttaataattcagatgat
gtgtttgttttcgttctgacgacgaaggtgggtggtttgggaacaaatttgactggcgcg
aacagggtcattatctttgacccggattggaacccctcaaatgatatgcaggctagggaa
cgtgcatggcgtattgggcagaagaaggatgttaccatttacagattgatcactcgaggc
acaattgaggagaaggtatatcacagacagatttataaacattttctcaccaataagata
ttgaagaatccacaacaaagaagattcttcaaagctcgggatatgaaagatcttttcatc
ttgaaagatgatggcgatagcaacgcctccacggaaacctctaacatcttcagtcagctg
gctgaagagataaacatcgtaggagttcaatcagacaatactgcagagggatcctcagag
caagcagatgtggatacgactgataaaactggtgaagctatggatgaagagacaaatatc
ttaaagagtctctttgacgcacatggaatacatagtgctgtgaatcacgacgccattata
aatgcaaacgacgaggaagagaagatgagacttgaacaccaagcatctcaagtggcacga
agagctgcggaagcattgcggcaatcacgaatgctgcgtagccgggaaagcatctcagtg
cctacatggacgggaagatctggttgtgcaggtgcaccatcatctgtacggaggagattt
ggatcaactgtcaattcccggttaacccagactggagacaaaccatcagtgatcaagaac
ggaatcagtgcgggtctatcttcaggaaaagcaccaactgctgcagagcttctcaacaga
atccgcggaagcagagaacaagcgattggcgttggcaacgagtcttcattaccgtcgtct
tcgggttcaagcagcagagtaggttcgttgcagccagagatcctgatcagacagatatgc
agttttgtacagagaaaaggtggaagtgcggacacgaccagcatcgtcaaccatttcagg
gatagcgtttcttgtgatgacaagccgttgtttaagaatctcttgagagagattgccacg
cttgagaagaatcaaaatagatcggtttgggtcctcaaatcagaatataaagactaa
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integrated database retrieval system
