Camelina sativa (false flax): 104747822
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Entry
104747822 CDS
T05044
Name
(RefSeq) succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00020
Citrate cycle (TCA cycle)
csat00640
Propanoate metabolism
csat01100
Metabolic pathways
csat01110
Biosynthesis of secondary metabolites
csat01200
Carbon metabolism
Module
csat_M00009
Citrate cycle (TCA cycle, Krebs cycle)
csat_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
104747822
00640 Propanoate metabolism
104747822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104747822
Enzymes [BR:
csat01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
104747822
6.2.1.5 succinate---CoA ligase (ADP-forming)
104747822
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104747822
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
Citrate_bind
Succ_CoA_lig
ATP-grasp_5
SDH_alpha
Motif
Other DBs
NCBI-GeneID:
104747822
NCBI-ProteinID:
XP_019092905
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All DBs
Position
15:complement(29115986..29118614)
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AA seq
444 aa
AA seq
DB search
MEIVSRPRGINLIKLEKLGQNRTMRGLVSKLVSRSLSVSGKWQQQQLRRLNIHEYQGAEL
MGKYGVNVPKGVAVGSLEQVKKAVQEVFPNESELVVKSQILAGGRGLGTFKSGLKGGVHI
VKRDQAEDIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLI
IACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGLAPKAADRKDSIEQVKK
LYELFRKSDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKEVFAMRDPTQEDPREV
AAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQVVEAFK
ILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVSLKVPVVVRLEGTNVEQGKRILKE
SGMKLITADDLDDAAEKAVKALAH
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagtgagccggccgagaggaataaatctcataaagttggaaaaattaggacaa
aatcgaacgatgaggggattggtgagcaaactcgtgtccagatctctctccgtctccggg
aaatggcagcagcaacagcttcgccgtctcaacatccacgagtatcagggagctgagctg
atgggcaaatacggtgtgaatgtgccaaaaggagtagctgttggttctctggaacaagtt
aaaaaggctgtccaagaagttttccctaacgaaagcgagttggttgttaagagccagatc
ttggctggtggaagaggtcttggaacattcaagagtggtcttaagggtggtgttcacatt
gttaaacgtgatcaggctgaagatattgctggaaagatgcttggacaagtactcgttacc
aaacaaactggtcctcaaggcaaagttgttagcaaggtttacttgtgtgagaaattgtca
ctcgtcaatgagatgtacttctccattattctggaccgtaaatctgctggaccgttgatc
attgcctgtaaaaaaggtggtaccagcattgaagatctcgctgagaagttccctgacatg
attatcaaggtaccaattgatgtatttgcaggaatcactgatgaagatgctgccaaggtt
gtggatggtctggctcccaaagctgctgacagaaaagattcgatcgaacaagtgaagaag
ctgtacgaactctttcgcaagagtgactgcacaatgttggaaatcaaccctcttgcagag
acatccactaaccaattggtagctgctgatgcgaaattgaacttcgatgataatgctgcg
ttccgacaaaaagaggtttttgccatgcgtgatccaacacaggaggatccacgagaggtg
gctgcagcgaaagttgacctgaactacatcggtctagatggagagattggttgcatggtg
aatggtgctggattggccatggcaacaatggacatcattaaattacatggtggaactccc
gccaatttccttgacgttggtggaaatgcttctgagcaccaggtggtggaagcgtttaag
atactgacatctgacgacaaagtgaaagcaatcctggtgaacatatttggtgggataatg
aaatgtgacgtgattgctagtggaatcgtgaacgctgcaaaagaggtatcattgaaagtg
ccagtggtggttcgtctagaaggaacgaatgtggagcagggaaagagaatcctcaaggaa
agtggaatgaaactcataacggctgatgatttggatgatgcggctgagaaagcggttaaa
gcattagctcactaa
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