Camelina sativa (false flax): 104749148
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Entry
104749148 CDS
T05044
Name
(RefSeq) serine/arginine-rich splicing factor RS31
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104749148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104749148
Spliceosome [BR:
csat03041
]
Common components
Common spliceosomal components
SR proteins
104749148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RNA_bind
RRM_5
SET_assoc
DbpA
RRM_fung
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
104749148
NCBI-ProteinID:
XP_010469031
LinkDB
All DBs
Position
16:complement(1088402..1090661)
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AA seq
258 aa
AA seq
DB search
MKPVFVGNFEYETRQSELEKLFGKYGRVDRVDMKTGFAFVYFEDERDAEDAIRKLDNFPF
GYEKRRLSVEWAKGERTRSRGDSKAALYQKPRATNTLFVINFDPIRTKEHDIEKHFEPYG
KVVNVRIRRNFSFVQFETQEDATKALEATNKSEILDRVVTVEYAKGGDERNDRYGGGRSP
RRSRSPVYRRRPSPDYGRRPSPEYGRPRSPEYDRYKGPAAYERRRSPDYGRRSSDYGRQR
SPGYDRYRSRSPVPRGRP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagtgttcgtcggcaatttcgagtacgaaactcgccagtcggaattggaaaaa
ttgttcggaaagtatgggagagtcgaccgagttgacatgaaaactggatttgcttttgtg
tactttgaggatgaacgtgatgctgaagacgcaattcgcaagcttgacaattttcctttt
ggatatgagaaacgcaggttatcagtcgagtgggcaaagggtgaacgtaccaggtctcgt
ggtgatagcaaggctgctttatatcagaagcctagggctacgaatacactgtttgtcatt
aactttgaccccataagaacaaaagagcacgacattgaaaagcactttgaaccctatggt
aaggtcgttaatgtgcgtatcaggcgcaacttctcattcgttcagtttgaaacacaagaa
gatgccacaaaagcccttgaagctactaataaaagcgaaatattggatagggttgtcact
gtggagtatgcgaagggtggtgatgaaagaaatgatcgatatggcggtggtcgtagcccg
agaagatctcgtagtcctgtgtaccgtaggcgtccaagccctgattatggtaggcgtcca
agtccagagtatggtcgtcctcgaagcccagagtacgacaggtacaaaggtccagcagct
tatgaaagacgcaggagtccagattatggacgtaggagttcggattatggtagacaaagg
agtcctggttatgaccgttacagaagtcgctctccagtcccaagaggaagaccatga
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