Camelina sativa (false flax): 104749191
Help
Entry
104749191 CDS
T05044
Name
(RefSeq) RAB6A-GEF complex partner protein 1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104749191
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
104749191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
WD40_Prp19
Beta-prop_WDR19_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
104749191
NCBI-ProteinID:
XP_010469083
LinkDB
All DBs
Position
16:1284145..1290895
Genome browser
AA seq
1126 aa
AA seq
DB search
MYMAYGWPQVIPLLAGSCPSSQRVVYLKLAGRLLLVVSPSHLELWGSSQQRVRLGKFMRD
EKSVREEGENLHAVWSPDSKLIAVLTSSFFLHIYKIKFTDKRVKPGERQPSELCFATISL
LLSEQVPFAGKDLSVSNFVRDSKTMLLGLSDGCLYSISWKGEFGGAFSIGFHSSDSNNDR
LLSYTFGNGRVSGVASETLASVDDFSTKSAIVQLELCTRSKLLFVLNSDGQLVVCSVNKK
GLKYTESIKAEKKLGGDVVCASVASEQQILAVGTRKGMVELYDLSQSIFLLRTVSLHDWG
YSADYTGPVSNIAWTPDNSAFAVGWKLRGLAVWSVSGCRLMSTVRQIGLSSTSSPKINPK
QDCKYEPLMNGTSAIQWDEYGYRLFATEEASCDRILAFSFGKCCLNRGVSGKTYVRQVMY
GDDRLLMVQAEDTDELKLLHLKLPVSYITQNWPVQHVAASEDGKYLAVAGLHGLILYDVR
FKKWRVFGDVSQEQQIHCKGLLWLGKIVVICNYIEASDTYELLFYPRYHLDQSSLLCRKV
LLGKPMVMDVYQDYILVSYLPFIIHVYHVKIYGELTPSSKADLQLSTVRELSIMTAKSHP
VAMRFVPDQHPRESELDNDLSSDLPDREPSRCLILRGNGELSLLDLVDGRERELTDSVEL
FWVTCGQSEEKTNLVEEVSWLDYGHRGMQVWYPSLGEDPFMQEDFLQLDPELEFDREVYP
LGLLPNVGVVVGVSQRMSFSASAEFPCFEPTPQAQTILHCLLRHLLQRDKNEEALLLAQL
SAEKPHFSHCLEWLLFTVFDAEISRPNPNRNQISGPGHLKKLSLLRKACDLIKNFPEYYD
VVVNVARKTDARHWADLFSAAGISTTLFEDCFQRRWYRTAACYILVIAKLEGVAVSQYCA
LRLLQATLDESLYDLAGELVRFLLRSGRDIEQAPTESDSLSPKLLGFLIFGSSHKKSSLD
KSSSFKDQSPHVASVKSILESHASYLMSGKELSKLVAFVKGTQFDIVDFLQRERYGCAQL
QNFAAGLELIGQKLQMSELQNRLDAEFLLAQMCSVKFKEWIVVLATLLQRSEVLYDIFRY
DLRLWKAYSMTLQSHLGFAQYHELLQILEDKLSATAGEESNRGSIS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcttacggatggccgcaggtgatcccgcttttagcgggatcatgtccgtct
tcacagcgagtcgtgtaccttaagctcgcaggtcggctattgcttgttgtttctccttct
catttggagctttggggatcttctcagcaacgagtgaggttgggaaaatttatgagagat
gagaagtcggtgcgagaagaaggagagaatttgcatgctgtgtggagtccagactctaaa
ttgattgctgttcttacatcatcattctttcttcatatatataaaataaaatttacggat
aaacgagtaaaacccggagagagacaaccatcggagttgtgttttgcaaccatatctctt
ttgctaagtgagcaggtcccttttgctgggaaggacttgtctgtgagcaattttgtgagg
gacagcaaaactatgcttttgggactctctgatggatgtttatatagtatttcctggaaa
ggagagtttggtggagctttcagtattggcttccattcttctgatagcaacaatgataga
ctcttgtcctacacttttggtaatgggcgagtttctggagtagcttcggaaacacttgca
tctgttgatgatttctcaacaaaatcggctattgttcagctggaactctgcactcgttcg
aaattattgtttgtgttaaattctgatgggcagctagtagtatgctctgtgaataagaaa
ggtttaaagtacactgagagcattaaagctgagaagaagttgggtggtgatgttgtttgt
gcatcagtggcttcagagcaacaaattcttgctgtaggtacaagaaaagggatggtggaa
ttatatgatctgtcacaatcgatctttctcttacgaacagtttctttgcatgactggggt
tattcagcggattacactgggcctgtcagtaacattgcatggacgcctgataattctgct
tttgcagttgggtggaagttgagaggacttgcagtttggtctgtttctggatgtagattg
atgtcaactgtccgccaaattggattgagttctacatcttcccctaaaattaacccaaaa
caagactgtaaatacgaaccactgatgaatggtacttcagccatccagtgggatgaatat
ggatatagactatttgctacagaggaggcatcatgtgatagaattcttgcattttccttt
ggaaagtgttgcttaaatagaggagtttcaggaaaaacttatgttcgtcaggtaatgtat
ggtgatgatagactactcatggttcaggcggaggacactgacgaacttaagcttttacat
ctaaaacttccagtttcttatattacccaaaattggcctgttcaacacgtggcagctagc
gaggatgggaaatacttggcggttgctggtttacatggcctgattttgtatgacgttaga
tttaagaagtggagggtctttggagatgtcagtcaagagcaacagattcattgcaagggt
ttgttatggctgggaaagattgtcgtaatctgtaactacatcgaagcttctgatacatat
gaactgcttttctatccaagatatcaccttgatcagagctctttactttgtcgaaaagtg
ctgcttggcaaaccaatggtgatggatgtttaccaggattatatactcgtatcttatctt
ccgtttatcatccacgtctaccatgtgaagatatatggtgaattgacaccttcgagcaaa
gcagatctacagctttccacagtaagagagttgtccatcatgactgcaaagagccatcca
gtagcaatgcgatttgttcctgaccagcatccgagagaaagcgagttggataatgatctt
tcttctgatttgccagacagggaaccctcaagatgtcttatactgaggggaaatggggag
ctttcacttcttgatttggttgatggacgagaaagggaacttacagactcagttgaacta
ttttgggtgacatgtggtcagtcggaggagaagacaaatcttgtcgaggaagtatcttgg
ctagattatgggcaccgaggaatgcaggtttggtatccttctcttggggaagaccctttt
atgcaagaggatttcctgcagttggatccagagttggaatttgatcgcgaggtgtatccc
ctgggacttttaccaaacgtgggtgttgttgttggagtttctcagaggatgtccttttcg
gcaagcgcagagttcccatgttttgagcctacaccccaggctcagactatactacattgc
ctgctccgccacctccttcagagagacaaaaatgaagaggcgttactcttagcacaatta
tcggcagagaaacctcacttctcccattgtctggagtggcttctttttactgttttcgat
gcagagatttctaggccaaatccaaaccggaaccagatttcaggacctggacatcttaaa
aagttatctcttttgagaaaagcttgtgatttaataaaaaatttcccggagtactatgat
gtggtagtgaatgtagccagaaagaccgatgcccgacactgggctgatttattttctgct
gctgggatatcaacaacgttgtttgaagactgcttccagcgaagatggtatcgaaccgca
gcgtgctatatacttgtgattgccaaactggaaggtgttgctgtcagtcagtactgtgca
ttgcggctattgcaggcgacacttgatgagtccctttatgatcttgctggagagctagtg
aggttcttgctaagatctggaagagacattgagcaggcgccaacagaatcagattcttta
tcacctaagcttctcgggtttcttatcttcggttccagccacaagaaatcatcactcgat
aagagctcttcgttcaaagaccaaagtcctcatgttgcttctgtaaagagcatacttgaa
agtcatgccagttacttgatgtctggtaaagaactttcgaagcttgttgcattcgtcaaa
ggcacccagtttgatattgtggattttcttcaacgagaaagatatggttgtgcgcagctg
cagaattttgctgcaggacttgagctgattgggcaaaagctgcaaatgagtgagctacag
aaccggttagatgcagagtttctattggctcagatgtgttctgtcaagttcaaagaatgg
atagttgttcttgccactctattacaacggtccgaggttctttatgatatattccggtat
gatctacggttgtggaaagcgtatagcatgacattacagtctcacctgggtttcgctcag
taccatgaattgcttcagattttagaggataaactctcagcgaccgcaggagaagaaagc
aatagaggttccatctcttga
DBGET
integrated database retrieval system
