Camelina sativa (false flax): 104749506
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Entry
104749506 CDS
T05044
Name
(RefSeq) SWI/SNF complex subunit SWI3B-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104749506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104749506
03036 Chromosome and associated proteins [BR:
csat03036
]
104749506
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104749506
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104749506
PBAF complex
104749506
GBAF(ncBAF) complex
104749506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
NEXCaM_BD
Motif
Other DBs
NCBI-GeneID:
104749506
NCBI-ProteinID:
XP_010469451
LinkDB
All DBs
Position
16:complement(2980085..2988018)
Genome browser
AA seq
462 aa
AA seq
DB search
MAAKAPDSGGSGEILPITPSLSETTSGVTAASQSTQPPSSSSDVDTVYVPSYSRWFSWTD
IDDCEVRSLPEFFNSKSSSKNPKFYIYLRNSIIKQYRDDHPRKISFTDVRRTLVSDVVSI
RRVFDFLEYWGLINHSSSSSAKPLKWDEKSAGDASSEPPTTVKETAKRICNGCKSICSVA
CFVCDKYELTLCARCYVRGNYRVGINSTEFKRVELSEESKKVWSEKETLQLMEAVMHYGD
DWKKVATHVTGRTEKDCVSQFVKLPFGEQFVKESDSEDSLEAFDKIKGSADLESGGSDKE
GSSPNKRMRLTPLADASNPIMAQAAFLSALAGTKVAEAAARAAVTALSDVDYEAEKNATG
DPHRQDANANSGGDITNSERAWADAKSLIQKEEQEVEGAIKEIVEVEMKKIRDRIVHFEK
LDLEMERSRKQLEDMKNLLFTDQLNIFFHTRKARKSEDRVDC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaaagctcccgattccggcggatctggggaaattctcccgattactccctct
ctctccgaaactacgtctggtgtcaccgcagcttcgcaatcgactcaaccgccgtcttct
tcttccgatgtcgatacagtctacgtacctagctactctcgttggttctcgtggactgac
atcgacgattgcgaggtccggtcactaccggagttcttcaattcgaaatcttcttccaaa
aaccctaagttttacatatacttgaggaactcaatcattaagcagtacagagacgaccat
cctcggaagattagtttcactgacgttaggagaaccctagtcagtgatgttgtctctatt
cgtcgcgtttttgattttcttgagtattggggacttatcaatcattctagctcctcctct
gctaagcctctcaagtgggacgaaaagtccgccggagatgcttcttctgagcctcccaca
actgtcaaagaaactgccaagagaatctgtaatggctgcaaatctatttgcagcgtagct
tgtttcgtctgtgataagtatgagttgacattgtgtgcgaggtgctatgtccgtggtaac
tatcgcgttggcattaactccacagagtttaagcgtgttgagcttagcgaggagtcaaaa
aaagtgtggtccgaaaaggaaacgctgcagctgatggaagctgttatgcactatggagat
gactggaagaaggttgcaactcatgttaccggtagaaccgagaaggactgtgtgtcgcag
tttgtcaagcttccttttggggagcagtttgtgaaagagtctgactctgaggattctttg
gaggcatttgataagatcaaggggtctgctgatcttgaatctggaggaagtgataaagaa
ggttcttctcccaataagcgtatgagattaacacctcttgcagatgcaagcaacccaata
atggctcaggctgcttttctttcagccttggctggcacaaaagttgcagaagcagcagct
cgagcggcagtgacagctttatctgatgtagactacgaggctgaaaaaaatgccactgga
gacccacatcgacaagacgccaatgctaactcgggtggtgacattaccaactcagaaaga
gcttgggctgatgcaaaatctctgatccagaaggaagagcaagaggtagaaggagccatc
aaagagatcgtagaagtggagatgaagaagattagagataggattgtacatttcgagaaa
ctggatttggaaatggagagaagccggaaacaattggaggatatgaagaacctgcttttc
actgatcaattaaacattttcttccacacaagaaaagcccggaaatctgaagatagagta
gattgttaa
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