Camelina sativa (false flax): 104749552
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Entry
104749552 CDS
T05044
Name
(RefSeq) chaperonin CPN60-like 1, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104749552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104749552
03110 Chaperones and folding catalysts [BR:
csat03110
]
104749552
03029 Mitochondrial biogenesis [BR:
csat03029
]
104749552
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104749552
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104749552
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104749552
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
104749552
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104749552
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104749552
Exosomal proteins of other body fluids (saliva and urine)
104749552
Exosomal proteins of breast cancer cells
104749552
Exosomal proteins of colorectal cancer cells
104749552
Exosomal proteins of bladder cancer cells
104749552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Flavoprotein
Motif
Other DBs
NCBI-GeneID:
104749552
NCBI-ProteinID:
XP_010469503
UniProt:
A0ABM0WDF0
LinkDB
All DBs
Position
16:3221804..3225660
Genome browser
AA seq
585 aa
AA seq
DB search
MYRLVTNVASKARIASKCTSQIGSRFNSTRNYAAKDIRFGVEARAMMLKGVEDLADAVKV
TMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGT
ISANGDREIGELIAKAMETVGKEGVITIQDGKTLFNELEVVEGMKIDRGYISPYFITNPK
TQKCELEDPLILIHEKKISNINAMVKVLELALKKQRPLVIVAEDVESDALATLILNKLRA
GIKVCAVKAPGFGENRKANLHDLAALTGAQVITEELGMNLDNIDLSMFGNCKKITVSKDD
TVFLDGAGDKTAIGERCEQIRSMVEASTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKLSTANFDQKIGVQIIQNALKT
PVYTIASNAGVEGAVIVGKLLEQDNPDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLLTTTEAVVTEIPTKEEASPGMGGGGGGGMGGMGGMGGMGF
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtatcggctagtcaccaacgttgcttcaaaagctaggattgccagcaagtgtacaagc
cagattggaagcaggttcaattccactaggaattatgcagcaaaagacattaggtttggt
gttgaagctcgtgctatgatgcttaagggtgtcgaggatcttgctgatgcagttaaagtc
actatgggacccaagggtcgtaatgtcattattgaacaaagctggggtgcaccgaaggtg
acaaaagatggtgtgactgttgccaagagcattgagttcaaggacagagttaagaacgtt
ggcgccagtcttgtcaaacaggttgctaatgccacgaatgacgtagctggtgatggaaca
acatgtgctaccgtccttacgcgagctatcttcacggaaggttgtaaatctgttgccgct
ggaatgaatgcgatggacctacgacgtggtatcaaactggcagttgatactgttgtgaca
aacttgcagagtcgagcacgcatgattagcacttctgaagaaatcgcccaagttggaaca
atatcagctaacggagatagagaaattggtgaactgattgcaaaggctatggaaactgtc
ggcaaagagggagtgatcacaattcaagatggcaagaccttgtttaatgagctggaagtt
gttgagggtatgaagattgacagaggatacatttccccgtacttcataacaaacccgaaa
acccaaaaatgtgaactagaagatcctctcattcttatccacgagaagaaaatttccaat
ataaacgctatggtgaaagtcttagaactggccctcaagaagcaaaggccgctagtgatt
gttgctgaggatgtggagagtgatgctcttgccaccctaattctgaacaaacttcgtgct
ggaatcaaggtctgtgctgtgaaggcccctggttttggagaaaacagaaaggccaattta
cacgatctagctgccctcactggagcccaggttataacagaggagttaggtatgaatctc
gacaacattgacctcagtatgttcggaaactgcaagaagataactgtatccaaagatgat
actgtttttctcgatggggctggtgacaagacagcaattggggaacgatgtgagcagatt
cgatccatggttgaagcgagcacgtctgattatgacaaggagaagttgcaagaaaggttg
gctaagctttcgggtggtgttgctgtactaaagattggtggagcgagtgaggcagaagtt
agcgagaagaaagatagagtaacggatgctctgaatgccactaaagcagccgtagaagag
ggtattgttccaggtggtggtgttgctcttttgtatgcctcgaaagaacttgagaagctt
tcgacagctaactttgatcagaaaattggtgttcaaatcattcaaaacgctctcaagaca
cctgtttacacaattgcttccaatgctggagtcgagggtgcagttatcgtaggcaagctt
ttggagcaagataaccctgacctcggttatgatgctgccaaaggagaatatgttgacatg
gtaaagtctggtattatcgatcctttgaaagtgatcagaaccgcattggttgatgctgca
agtgtctcgtctttgttgacgacaacggaagcagttgtgactgagattccaacgaaagag
gaggcgtctccgggcatgggcggcggcggcggcggcggtatgggtggcatgggcggtatg
ggaggaatgggtttctga
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