Camelina sativa (false flax): 104749658
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Entry
104749658 CDS
T05044
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104749658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104749658
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104749658
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104749658
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Aconitase_B_N
Motif
Other DBs
NCBI-GeneID:
104749658
NCBI-ProteinID:
XP_010469633
UniProt:
A0ABM0WDR9
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Position
16:3968887..3970159
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AA seq
252 aa
AA seq
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MSLFAKEDSIQIREVCRENLESEMCLIRAAVDDFPFVGMVCRPVVSDFPEIVLGTFNTLT
EYNYETLKTNVNNIVEMLQLGLTLSDENGNLPTCETDKYCTWQFNIRNVAENNQTGIDPE
EFANLMMSSGTVLNESVHWVTFHGGYDVGYLLKLLTNQNLPETQSGFFEMISLYFPRVYD
VKHLMKFCNDAYGDLNYLAELLDVERVGISHQAGSDSLLTSCTFRKLQEVFFIGSIEKYS
GVLFGLGVVTNG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgtttgcgaaggaagattcgattcaaatccgtgaggtgtgtagggaaaatcta
gaatcagagatgtgtctgattcgagcagcggtggatgatttcccgttcgtcggaatggtg
tgtagaccagtcgtcagcgattttccagaaatcgtgttaggaactttcaataccctaacc
gagtacaactacgaaaccctaaaaacgaacgtcaacaatattgtcgaaatgcttcagctc
ggactcactctctccgacgagaatggaaacctcccaacttgtgagactgacaaatactgt
acctggcagttcaatatccgcaacgtcgctgaaaacaaccaaaccggtatagatcccgaa
gaattcgccaaccttatgatgtcctctgggactgtgttgaacgaaagcgtccactgggtt
acattccacggcggatacgatgtcgggtacttgctcaagctcctcactaatcagaatctt
ccagagacgcaatcgggattctttgagatgatcagtttgtatttccctagagtttacgac
gtcaaacacttgatgaagttctgcaacgatgcttatggagatctcaactatttggctgag
ctgctcgatgtggagagagttgggatttctcaccaggccggatcagacagcttgttgacg
tcctgtacattcagaaagctgcaggaggttttcttcattggttctattgagaaatattct
ggtgttttgtttggattaggtgttgtcaccaatggttag
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