KEGG   Camelina sativa (false flax): 104749668
Entry
104749668         CDS       T05044                                 
Name
(RefSeq) DNA repair protein RAD50-like
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03440  Homologous recombination
csat03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    104749668
   03450 Non-homologous end-joining
    104749668
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csat03032]
    104749668
   03400 DNA repair and recombination proteins [BR:csat03400]
    104749668
DNA replication proteins [BR:csat03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    104749668
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     104749668
    BRCA1-C complex
     104749668
   NHEJ (non-homologous end-joining)
    MRX complex
     104749668
SSDB
Motif
Pfam: AAA_23 AAA_15 AAA_21 SbcC_Walker_B SMC_N Rad50_zn_hook AAA_29 ABC_tran
Other DBs
NCBI-GeneID: 104749668
NCBI-ProteinID: XP_010469643
LinkDB
Position
16:complement(4033433..4041855)
AA seq 1316 aa
MSTVDKMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPNAR
SGHRFIHDPKVAGETETKAQIKLRFKTAEGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
NPHTGEKVCLSFRCADMDREIPALMGVSKAILENVLFVHQDESNWPLQDPSTLKKKFDDI
FSATRYTKALEVIKKLHKDQAQEIKTFKLKLENLQTLKDAAYKLRESIAQDQERTESSKV
QMLELETSIQKVDAEVHNKEMMLKDLRKLQDQVSRKTAERSTLFKEQQRQYAALPEENED
TIEELKEWKSKFEERIALLETKIRKMEREMDDTQTTISSLHNAKTNYMLEISKLQTEAEA
HMLLKNERDSTIQNIFSRHNLGNVPSTSFSTEVVLNLTNRIKSRLGELEMDLLDKKKSNE
TALSTAWYCYMDANDRWKSIEAQKRAKDEIKMGISKRIEEKENERDTFEFEISSVDVKQT
DEREKQVQLELERKSKQNSERGFESQIEQKQHEIYSMEQKIKTLNRERDVMAGDAEDRVK
LSLRKTEHENLKKKHKKIIDECKDRIRGVLKGRLPPEKDMKKEIVQALRSIEREYSELSL
KSREAEKEVNMLQMKIQEVNNSLFKHNKDTESKKRYIESKLQALKQEAVTIDAYPKLLES
AKEKRDESKRKYNMAIGMREMFEPFEEVARSRHFCPCCERTFTSDEEDSFVKKQRVNASS
TVEHLKMLAVESSNADSVFQQLDKLRAIFEEYSKLTSEIIPLAEKTLQEHTEELDQKSQA
LDDVLGISAQIKADKDAIEALVQPLENTDRIFQEIVSYQKQIEDLEYKLDFRGLGVKTME
EIQSELNSLQSSKDKLHDELEKLRDDQIYMERDISFLQARWHAVREEKAKAANLSRDVTK
AEEDLERLAEEKSQLDFDVKYLTEALGPLSKEKEQLLSDYNDMKVRRNQEYEELAEKKRN
YQQEVEALRRGSSKINEYHELKKGERLNDIQEKQRLSGTQLQSCEARKNELAGELNRNKD
LMRNQDQLRRNIEDNLNYRTTKAEVEKLTREIELLEEQILNIGGIPAVEAEMVKISRERE
RLLSELNRCRGTVSVYDSSISKNRVELKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYY
NALDKALMRFHTMKIEEINKIIRELWQQTYRGQDMDYIRIHSDSEGAGTRSYSYKVLMQT
GDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAGALL
RIMEDRKGQENFQLIVITHDERFAQMIGQRQHAEKYYRVAKDDMQHSIIEAQEIFD
NT seq 3951 nt   +upstreamnt  +downstreamnt
atgagtacggtcgataaaatgctgatcaagggtatcagaagcttcgacccagaaaataag
aacgtcgttacttttttcagacctttaaccctaatcgtcggtgctaacggtgccggcaaa
actacgattatagagtgcttgaaggtatcttgtacaggagagctaccaccgaacgcgagg
tctggtcacagatttattcatgaccctaaggttgctggggaaacggagacaaaagcacaa
attaagctgagattcaagacagctgaaggcaaggatgtggtttgtataaggtcatttcag
ttgacacagaaggcttcaaagatggagtacaaggcaattgagagtgtgcttcaaaccatt
aatcctcacactggagagaaagtatgtctcagcttcagatgcgctgacatggatagggag
ataccagctttgatgggtgtgtccaaagctattttagaaaacgtcctatttgtgcatcaa
gatgagtctaactggccactgcaggatccttctactttgaaaaagaagtttgatgacatt
ttctcagccaccagatatacaaaggctctggaagttattaagaaacttcacaaggatcaa
gctcaggaaataaaaacttttaaattaaagttggaaaatctgcagaccttgaaagacgca
gcttataagcttcgtgagagcattgctcaagatcaagaaaggacagagtcttctaaagtt
cagatgttggaactggaaaccagcattcagaaagtcgatgctgaagttcataataaggaa
atgatgttaaaagatctgagaaagctacaggaccaagtatcaagaaaaactgccgagagg
agcaccttgtttaaggagcagcagagacagtatgcagcattacctgaggaaaatgaagat
accattgaagaattgaaagaatggaaaagcaagtttgaagaaagaattgctcttttagag
accaaaattcgaaaaatggagagagagatggatgacacacaaactacaatttcttcgctt
cacaatgcaaaaactaactatatgctggagatcagcaagctacaaacagaagctgaagct
catatgctgctgaagaatgaaagagattctaccatccagaatattttttctcgtcacaat
ttaggaaatgttcctagtacctccttcagcactgaggttgttttgaatctcacaaatcga
ataaaatcaagactgggtgaacttgagatggacttgcttgataagaagaaatcaaatgaa
actgctctaagtacagcttggtattgctatatggatgctaatgatcgttggaaaagcatc
gaagctcagaaacgagctaaagatgaaatcaagatgggcatatcaaaacgcatagaagag
aaagaaaatgagcgtgatacatttgaatttgaaatttcctccgtggatgttaaacaaact
gatgaaagagagaaacaagtgcaacttgaacttgagagaaagagtaaacagaattctgaa
agggggtttgaatcccaaatagaacagaaacagcatgagatatacagcatggagcagaaa
attaaaacactgaatcgagaaagagacgttatggctggtgatgctgaggatagagtgaaa
ttgtctttaaggaagacggaacatgagaatcttaagaagaaacacaaaaagataatagat
gagtgcaaggatcgaattagaggggtgctgaagggtagattgccacccgagaaggacatg
aagaaggaaatagttcaagctctgaggtcaattgaaagggaatatagtgagctgagtttg
aaatcccgagaagcagaaaaggaggtcaacatgttgcagatgaagatacaagaagtaaac
aatagtctattcaaacataacaaggatacagaatctaaaaagagatacattgagtccaag
cttcaggccttaaaacaggaagcagttaccattgatgcttatcccaaattgttggagtca
gctaaggagaaaagagatgaaagtaaaagaaagtataacatggcaattggaatgcgcgag
atgtttgaaccttttgaggaggtagcacgttcacgtcatttttgtccttgctgcgagcgc
acttttacatctgacgaagaggatagctttgttaagaagcaaagggtaaatgcttcaagc
accgtggagcatcttaaaatgttagctgtggagtcttccaatgctgactctgtatttcag
cagttggacaaactgcgggcaatttttgaagagtactcgaaactaactagtgaaattatt
cctctcgctgagaaaactttgcaagagcatacagaagagctggatcaaaagtctcaagct
ctcgatgatgtattaggaatctcagcccaaataaaagctgacaaagacgcaattgaagca
ctggtgcagcccctggaaaatactgataggatctttcaggaaatcgtatcataccaaaag
caaatagaagatcttgaatataagctcgatttcaggggtcttggtgttaaaactatggaa
gaaatccaatcagaattaaatagcctccaaagcagcaaggataaattgcacgatgagctg
gagaaacttagagatgaccagatttacatggaacgtgatatatcattcctccaggccaga
tggcatgcagtaagggaggagaaggctaaagcagccaatttgtcacgcgacgttacaaag
gcagaagaagacctagagcgtttagccgaggagaaaagtcaacttgactttgacgtgaag
tatttgaccgaggcacttggcccgttgtccaaggaaaaggagcagttgctgagtgactac
aatgatatgaaggttagacgtaatcaagagtatgaagaactggctgagaaaaagagaaac
taccaacaggaagttgaggcattacgcaggggcagttctaagataaatgagtatcatgaa
ttgaagaaaggagagcgcttaaatgatattcaagagaagcagcggctgtccggaactcag
cttcagagctgtgaagctagaaagaatgaacttgcaggtgaactgaacagaaataaagac
ttgatgcggaaccaagatcaactcagaagaaatatagaggataacttgaactaccggaca
acaaaagcagaagttgagaaacttacacgtgaaattgaattattggaagagcaaatattg
aatattggtgggattcctgcagttgaagctgaaatggtaaagatatcacgggaaagggaa
agactactttcagagctgaaccggtgtcgtggaacagtgtctgtttacgacagcagtatt
tcaaaaaacagagtagagctaaaacaggcacaatacaaggacatagataagcggcacttt
gatcaactgatccagctaaagacaactgaaatggcaaataaagacttggatagatactac
aatgcccttgacaaagcactaatgcgattccacacaatgaaaatagaggaaataaataag
attataagggaactgtggcagcagacatacagaggtcaagatatggattacatacgaata
cactcagactccgaaggtgcaggcacccgctcttacagctacaaggttcttatgcagact
ggtgatacagaacttgaaatgagaggaagatgcagcgcaggtcaaaaggttcttgcttca
ttgataataaggttggctttagccgagacattttgcttaaactgtggaatattagccctt
gacgagccaactacaaacctggatgggcccaattcagaatctcttgcaggagctcttctt
aggatcatggaagacagaaagggccaagagaatttccaactcatagtcattacccatgat
gaacgcttcgctcaaatgattggccaacggcaacatgctgaaaaatattaccgtgtcgca
aaagatgatatgcaacacagcataatcgaggctcaagagatctttgattga

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