Camelina sativa (false flax): 104749910
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Entry
104749910 CDS
T05044
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00730
Thiamine metabolism
csat01100
Metabolic pathways
csat01240
Biosynthesis of cofactors
Module
csat_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
104749910
Enzymes [BR:
csat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
104749910
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
104749910
NCBI-ProteinID:
XP_010469924
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Position
16:5705937..5708787
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AA seq
642 aa
AA seq
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MASVHSTLMSVVCNNKTHSAWPKLPNSSLLPGFDVVVPATATTRFKTTTPATLTFDPPTT
NNSERAKQRKHTVDPSSPDFQPIPSFQECFPKSTKEQREVVHEESGHVLKVPFRRVHLSG
GEPAFDSYDTSGPQDVNPNIGLPKLRKQWIDRREKLGTPRYTQMYYAKQGIITEEMLYCA
TREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVKVNANIGNSAVASSIEEEV
YKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWE
VFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLSYHKENFAY
EHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDVQVMNE
GPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALL
CYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKQHPHAQAWDDALSKARFEFRWMDQF
ALSLDPMTAMSFHDETLPADGAKVAHFCSMCGPKFCSMKITEDIRKYAEENGYGSAEEAI
KQGMDAMSEEFNIAKKTISGEQHGEVGGEIYLPESYVKSAMK
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtacacagtactttgatgtcggtcgtatgcaacaacaagactcactctgct
tggcctaaacttccaaactcttccttgttacctggattcgatgtggttgttccagctact
gctactactcgattcaagacaaccacaccagccactctcacgtttgatccaccaacgact
aataattctgagagagctaagcagaggaagcacaccgttgatccttcttctcctgatttt
caaccaatcccatcttttcaagaatgctttcctaagagcactaaagaacaaagggaggtt
gttcatgaagaatctggtcatgtgcttaaagttccttttagacgtgttcatttgtctggt
ggtgagccagcttttgatagttatgacactagtggtcctcaagatgttaacccaaacatt
gggcttcctaagctaaggaagcagtggattgatcgccgagagaagctaggaacaccaaga
tacactcaaatgtactacgctaagcaagggatcataactgaggagatgctctactgtgct
accagggagaagctagaccctgagtttgttagatcagaagttgcgagagggagggccatc
atcccttccaacaagaagcatttggagctggaaccgatgattgttggtagaaagtttttg
gtcaaggtcaatgctaatatcggaaactctgctgttgctagctctattgaagaggaagtc
tacaaggttcagtgggcaacaatgtggggagctgatacaatcatggatctctctactggc
cgtcacatccacgagacacgcgagtggatccttaggaactcagctgtgcctgttggtact
gttcctatttatcaagcacttgagaaagtggatggaattgctgagaatcttagctgggaa
gtcttcagagagactctgattgaacaagctgagcaaggtgtagactatttcacaatccat
gctggagttttgctgcgttacattcccttaactgccaagcgtatgaccgggatcgtttcg
cgtggaggatccattcatgcgaaatggtgtttatcttaccacaaggagaactttgcttat
gagcactgggatgacattctagacatttgtaaccagtatgatgtggctctttcaattggt
gatggtctgagacctggatccatctatgatgctaacgacactgctcagtttgcagagctc
cttactcaaggtgaactaactcgccgagcatgggagaaagatgtgcaggtgatgaatgaa
ggaccagggcatgtcccaatgcacaagattccagagaatatgcagaagcaattggaatgg
tgtaacgaggcaccattttacacccttggtcctttgactactgatatcgcccctggatat
gatcacatcacctctgccattggtgctgccaatatcggagccttgggaacagctcttctt
tgctatgtaacaccaaaagagcaccttgggctaccaaacagggatgacgtgaaggccggg
gttatagcatacaagatcgctgctcatgcagctgatctagccaaacagcatccacatgcg
caggcatgggatgatgcgctgagcaaagcgcggtttgagttcagatggatggaccagttt
gctctgtcgttggaccccatgactgctatgtctttccatgatgaaactcttccagctgat
ggagccaaggttgcacacttttgctccatgtgtggaccaaaattctgctccatgaagata
acggaagacatccgtaagtacgcagaggagaatggttatggcagtgctgaagaagccatc
aaacaaggaatggatgctatgagtgaagagttcaacatcgccaagaaaaccatcagtgga
gaacagcacggtgaagtaggtggagaaatctatttgccagagagctacgtcaagtctgct
atgaaataa
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