Camelina sativa (false flax): 104750012
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Entry
104750012 CDS
T05044
Name
(RefSeq) U-box domain-containing protein 12-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104750012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104750012
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104750012
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
U-box type E3
104750012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
zf-RING_UBOX
MLKL_N
Neurochondrin
HEAT_2
zf-Nse
zf-C3HC4_4
Arm_2
KAP
zf-C3HC4_2
TPD52
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
104750012
NCBI-ProteinID:
XP_010470044
LinkDB
All DBs
Position
16:6548530..6551351
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AA seq
657 aa
AA seq
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MAKSEKHKLAQTLIDSVNEIASISDHRAPMKKHCSNLSRRLMLLLPMLEEIRDNCEESTI
PDQVVTALLSLKESLVPAKDLLAFVSQVSKIYLVLERDQVMVKFQKVTALLEQALSGIPY
ENLEISDELKEQVELVLIQLRREIGRGGDAYDDELYRDVMSLYNDTGSVTDSDMLRRVAV
KLQLMTITDLTQESLALLDMVSLSDGDPGDSFEKMSMVLKRIKDFVQTDNPNLDDAPMRL
KSPLQKAQDGDLNLPILPEDFRCPISLELMNDPVIVSSGQTYERECIKKWLEGGHLTCPK
TQETLTSDTVTPNYALRSLIAQWSQWCESNGIEPPKRPNNSQPSSKASSSSSTSADEHNK
IEELLTKLTSQHPEDQRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTVSSDSRIQE
HAVTSILNLSICQENKERIVYSCGAIPGIVHVLRKGSMEARENAAATLFSLSVIDENKVA
IGTAGAIPPLVTLLSEGSQRGKKDAATALFNLCIYQGNKGKAVRAGLVPVIMRLLTETAS
GMVDEALAILAIISSHPDGKMVAGAADAVHVMVDFIRSGSPRNKENAAAVLVHLCSWDQQ
HLIEAQKLGIMSLLIEMAENGTDREKRKAAQLLNRFSRFNDQQKQSGLGVEDQISLI
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcagagaaacacaagttagcccaaaccttaatcgattcagtaaacgaaatc
gcttcgatttcagatcaccgcgcaccgatgaagaaacactgtagcaatctctcccgtcga
ttgatgcttcttcttcctatgcttgaagagatcagagacaactgtgaagaatcaacgatc
cctgaccaagtggtgacggctttgttatctctcaaggaatcgcttgttcctgctaaggat
ttgctcgctttcgttagccaagttagcaaaatttacctggtgttggagagagatcaagtg
atggttaaatttcagaaagtgacggctctattggaacaagctttaagtggaatcccttat
gagaatcttgaaatttcagatgagcttaaagaacaggttgagcttgttctaattcagtta
agaagagaaataggaagaggcggtgatgcgtatgatgatgagttatatagggacgttatg
tctctttataatgatacaggcagtgtaacagattcggatatgctcaggagagtggcagtg
aagcttcagttgatgactataactgaccttacgcaagagtctttggctttacttgatatg
gtcagtttgagtgacggcgatccaggtgatagctttgagaagatgtcgatggttctcaag
agaattaaggactttgttcaaaccgataatcctaacttggatgatgctcccatgagacta
aaatcaccgcttcagaaggcacaagatggtgatctaaatttgccgatactgcctgaagat
ttccgttgtccgatttctctagaattgatgaatgatccagttattgtttcttcagggcag
acgtatgaacgtgagtgcattaagaagtggcttgaaggagggcatttgacgtgtccaaag
acgcaagaaacgctgacaagtgataccgtcacaccgaactatgctttaagaagccttata
gctcaatggtctcaatggtgtgaatccaatggcatcgaacctccaaagcgtcccaacaat
tctcaaccgagtagtaaagcctcatcttcctcctcaacctctgctgatgaacataacaag
attgaagaactcctaactaagctcacatcgcaacatcctgaagaccaaagatccgctgca
ggagaaatccgtcttctagcgaaacagaacaaccataaccgagtcgccattgctgcatcc
ggcgccatccctcttctggtgaatctcctcacggtatccagtgactcccggattcaagaa
cacgctgtgacatcgattctcaacctctcgatatgccaagagaacaaagaaaggattgtt
tattcatgtggagcgattccaggtattgttcatgtgctccggaaaggcagcatggaagct
agagaaaacgcagcagccacacttttcagcctttcggttatagacgagaataaagtggca
ataggcaccgcaggagcgatcccgcctcttgtgaccttgctgagcgaaggatcacagaga
ggcaaaaaagatgcggcgactgctctgttcaatctctgcatatatcaagggaacaaagga
aaagctgtgagagccggtttagttcccgtgataatgcgtttactaacagagacggcaagc
ggaatggttgatgaagcacttgctatattagccataatatcgagtcacccggatgggaaa
atggtagctggagccgctgatgcggttcatgttatggtagattttataagaagcgggtca
ccacggaacaaagagaacgcagctgcagtattagtgcacttgtgttcatgggatcagcag
catttgattgaagctcagaaattagggattatgagtcttttaatagaaatggctgagaat
ggtactgacagagaaaaacgcaaagcggcacagttacttaaccgctttagccgttttaac
gaccagcagaaacagtctggtttaggtgtcgaagatcaaatctctctaatctga
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