Camelina sativa (false flax): 104750098
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Entry
104750098 CDS
T05044
Name
(RefSeq) chaperonin 60 subunit alpha 1, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104750098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104750098
03110 Chaperones and folding catalysts [BR:
csat03110
]
104750098
03029 Mitochondrial biogenesis [BR:
csat03029
]
104750098
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104750098
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104750098
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104750098
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
104750098
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104750098
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104750098
Exosomal proteins of other body fluids (saliva and urine)
104750098
Exosomal proteins of breast cancer cells
104750098
Exosomal proteins of colorectal cancer cells
104750098
Exosomal proteins of bladder cancer cells
104750098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Ribosomal_L29
Motif
Other DBs
NCBI-GeneID:
104750098
NCBI-ProteinID:
XP_010470145
UniProt:
A0ABM0WF10
LinkDB
All DBs
Position
16:7461345..7464319
Genome browser
AA seq
586 aa
AA seq
DB search
MASANALSSASVLCSSRQSKLGGGSQQQGQRVSYNKRANRRFSVRANVKEIAFDQHSRAA
LQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIRE
VASKTNDSAGDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKTVLGLIEELQKKAR
PVKGRDDIKAVASISAGNDDLIGSMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID
RGYISPQFVTNPEKLLAEFENARVLITDQKITAIKDIIPILEKTTQLRAPLLIIAEDVTG
EALATLVVNKLRGVLNVVAVKAPGFGERRKAMLQDIAILTGAEYLASDMSLLVENATIDQ
LGIARKVTISKDSTTLIADAASKDELQARIAQLKKELFETDSVYDSEKLAERIAKLSGGV
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTAIPAIKETFEDA
DERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIMFSEWELGYNAMTDTYENLLEAGVI
DPAKVTRCALQNAASVAGMVLTTQAIVVDKPKPKAPAAAAPEGLMV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgctaacgctctctcttcagcctccgtcctctgttcttcccgtcagagtaag
ttgggaggaggaagtcagcagcaaggtcagagagtaagctacaacaagagggcaaacaga
cgttttagtgttagagcaaatgtaaaggagattgcttttgaccagcactctagagctgct
cttcaagctggtattgacaagcttgctgattgtgttggtctcactcttggacctagaggg
aggaatgttgtgttggatgaatttggaagtcctaaagtggtgaatgatggagtcaccatt
gcaagggctattgagttacctgatgccatggaaaacgctggtgcagctcttattcgtgag
gttgcgagtaagactaatgactcggctggtgatgggacgaccactgcgtctatccttgct
cgggagatcattaaacacggattgttgagcgtcacttctggtgcgaatcccgtttccctc
aagagaggaattgataagactgtgctaggtctgatcgaagagcttcagaagaaagctagg
cctgtgaaaggtcgtgatgacatcaaagctgttgcttctatctctgctggaaatgatgac
cttatagggtcaatgattgctgatgccattgacaaagttggacctgatggtgttttgtcc
attgaatcttcatcctctttcgagaccactgttgaagttgaagaagggatggagattgac
agaggttacatctcgcctcagtttgttacaaaccctgagaaactactagctgagtttgag
aacgccagggttttgatcactgatcagaagatcactgcaatcaaagacatcatccctatt
ttagagaagaccactcagcttcgagctccattgttgattattgcagaggatgttactggt
gaagccttagctacccttgtcgtgaacaagctccgtggtgtccttaacgtcgttgccgtt
aaagctccaggatttggagaaagaagaaaagccatgcttcaagatattgcaatcttgaca
ggagctgagtacctagccagtgacatgagcttgctggttgaaaatgcaaccatagatcaa
ttgggtattgcccgtaaagtgacgattagcaaagactcgactaccctcattgcagatgca
gcttccaaggacgagttacaagctcggattgctcagctgaagaaagaattattcgagact
gattcagtatatgactcagagaagctcgctgagagaatcgctaagctatctggtggtgtt
gctgtcattaaagtcggtgcagcaaccgaaactgagcttgaagaccgtaagctccgtatc
gaggatgcaaagaacgcaacatttgctgctattgaggaaggtatagttccaggtggtggt
gctactttggtccatctctccactgctattcccgccattaaggagacctttgaggatgct
gatgaacgtttgggagctgatatagtacaaaaggcattggtggcaccagctgcacttatt
gcacagaatgctggaatcgaaggagaggttgttgtcgaaaagattatgttcagcgaatgg
gagcttgggtacaacgcaatgactgatacatacgagaatctgttggaagctggagtgatt
gatccggcgaaagtgacaagatgtgctctacagaacgctgcttccgtagcaggaatggta
ctgaccactcaggccattgttgtcgacaaaccaaaacccaaggctcctgctgctgctgct
cctgagggtctcatggtgtaa
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