Camelina sativa (false flax): 104750142
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Entry
104750142 CDS
T05044
Name
(RefSeq) auxin response factor 1 isoform X1
KO
K14486
auxin response factor
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104750142
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
104750142
NCBI-ProteinID:
XP_010470197
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Position
16:complement(8037216..8042582)
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AA seq
666 aa
AA seq
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MAASNHSSEKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGL
EQQMPSFNLPSKILCKVINIQRRAEPDTDEVYAQITLLPELDQSEPISPDAPVQEPEKCT
VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIF
RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQMNIPSSVISSH
SMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEG
EEAPEKRFSGTIVGVQENNSSVWLDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANNT
PSSQPQPPQRNKRPRPPGLPTPIPGPSAPVTPDGVWKSPADTPSSVPLFSPPAKAAMFSH
GGNKSFGVSLGSAFWPTHADSAAESFASAFNNESTEKKQTNGNVCRLFGFELVENVNVDE
CFSAASVSTGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSR
QIRSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDED
DMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLTVNARLLPKNDVDENGNIDRRSS
SMAGSR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcagctagcaatcattcatctgaaaaacctggaggggttttaagtgatgctctatgt
agggagctctggcatgcctgtgctggacctcttgtaaccttacctcgtgaaggggaacga
gtttattatttccctgaaggccacatggagcagctggaggcatcaatgcaccaaggtttg
gagcaacagatgccttccttcaatctcccatctaagattctctgcaaagtgatcaacatc
cagcgcagggcagagcccgacactgacgaagtatatgcacaaataaccttactgccagaa
ctggatcaaagcgaaccaatcagcccagatgcccctgttcaagaacctgaaaagtgcaca
gtacattcattctgcaagacactaactgcttcggacacaagcacacatggtggattctct
gtgctacggagacatgcagatgattgtcttccacccttggatatgtcccaacaaccaccg
tggcaagaattggttgcaactgatttgcacaataatgaatggcattttaggcacattttc
cgagggcaaccaaggcgccatttgctaacaactggatggagtgtttttgttagctcgaag
aaactagtggcgggtgatgcgttcatattcttgagaggtgagaatgaagagctccgagta
ggtgttaggaggcacatgagacaacagatgaatatcccatcatctgttatctcaagtcat
agcatgcatatcggggtccttgcgactgcagctcatgccattacaacaggaacaatcttt
tctgtcttctacaagccaaggacaagtaggtcagagtttattgtgagcgtcaataggtat
ctcgaagctaagacacagaagctgtctgtaggcatgcgtttcaagatgagattcgagggt
gaagaagctcccgagaaaaggttcagtggcacgatagttggcgttcaggaaaacaattct
tcggtttggcttgattctgaatggagatcgctgaaggttcaatgggacgagccctcatct
gtatttcgtcctgagagagtttcaccatgggaacttgagcccctagttgcaaataatacc
ccttcctcacaacctcagcctccacaaaggaacaaacgaccgagacctcctggtttgcct
acaccaattcccggtccatctgctccagttactccagatggtgtgtggaaatccccggca
gatactccttcctcggtgccattattctctcctcctgccaaagctgctatgtttagtcat
ggtgggaacaaatcatttggagtatcccttggatcagccttttggcccacccatgcagat
agtgctgctgaatcctttgcttcagcgtttaacaatgaatctactgaaaagaaacaaacc
aatggaaatgtctgcaggctttttgggtttgagctagttgaaaatgttaacgtggatgaa
tgtttttctgctgcttctgtgtctactggtgctgtcgctgtagatcaacctgtaccatcc
aatgagtttgactctggtcagcaatctgagccgttaaacatcaaccaatctgatattccg
tcaggaagtggtgaccctgagaaatcctctttgaggtctcctcaagaatcacaaagtaga
cagatacgtagctgcacaaaggtccacatgcaaggcagtgcagtagggagagccgttgat
ctgacaaggtcagagtgctacgaagatctgtttaagaaactggaagagatgttcgatatc
aagggtgaactcttagaatctaccaagaaatggcaggttgtttacaccgatgatgaagat
gacatgatgatggttggtgatgatccatggaatgagttctgtggaatggtgagaaagata
ttcatctacacacctgaggaagtgaagaaactttcaccgaagaacaaactcacagtcaat
gcacggttgctgccaaagaatgatgtagacgaaaatgggaacatagatcgcaggtcatcg
tctatggctggatcaagatga
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