Camelina sativa (false flax): 104750333
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Entry
104750333 CDS
T05044
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104750333
03036 Chromosome and associated proteins [BR:
csat03036
]
104750333
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104750333
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104750333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
Tex_central_region
Spt6_S1
HHH_9
HHH_3
HTH_44
Tex_N
CRA
Tex_YqgF
S1
Motif
Other DBs
NCBI-GeneID:
104750333
NCBI-ProteinID:
XP_019093830
LinkDB
All DBs
Position
16:11029269..11036224
Genome browser
AA seq
1438 aa
AA seq
DB search
MADFIVDEDDGLGHPKRGGLKKKKFRQGSDISAMRDANEIFGDVDELLTIRKKGLASSER
MERRLEDEFEPTVLSEKYMTGQDDEIRQLDIPERMQISEESTGSPPVDELSIEEESNWIY
AQFTSLLKESDGQGVHSFEGRGFSVNKDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLLD
TADVDGANQDKKPETKWHKVFWMIQDLDKKWLLLRKRKMALHGYYTKRYEEESRRVYDET
RLNLNQYLFESVIKSLNVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKSQYSIC
SKAGLWEVANKFGYSAEQLGLALSLEKLVDELEDAKETPEEMAMNFVCAMFEDPHAVLKG
ARHMAAVEISCEPSVKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLREKPLSK
FEGAQWLLIQKAEEEKLLQVTFKLPENHMNRLISDCNEHYLSVGVSKYAQLWNEQRKLIL
EDALHTFLLPSMEKEARSLLTSRAKSRLLLEYGQALWNKVSAGPYQKKEMDISSDEEVAP
RVMACCWGPGKPPNTFVMLDSSGEVLDVLYAGSLTLRSQNVNDQQRKKNDQDRVLKFMMD
HQPHVVALGAVNLSCTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLPRLYENS
RISGEQLPQQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLHPLEHFLQVDEKYG
MVEQVMVDITNQVGIDINLAASHEWFFSPLQFISGLGPRKAASLQRSLVRAGSIFVRKDL
IMHGLGKKVFVNAAGFLRIRRSGLAASSSQFIDLLDDTRIHPESYSLAQELAKDIYDQDV
RGDSNDDEDAIEMAIEHVRDRPGSLRKVVLDEYLASKKRENKKETYSNIMRELSFGFQDW
RIPFKDPSPDEEFYMISGETEDTIAEGRIVQASVRRLQGGRAICVLDSGLTGMLTKEDFA
DDGRDIVELSERLKEGDILTCKIKSIQKQRYQVFLICKESEMRNNRHQHNQNVDAYYHED
RNSLQLVKEKARKEKELVRKHFKSRMIVHPRFQNITADQATEYLSDKDFGESIVRPSSRG
LNYLTLTLKIYDEVYAHKEIVEGGKENKDITSLQCIGKTLKIGEDTFEDLDEVMDRYVDP
LVSHLKTMLNYRKFRKGTKSEVDDLLKIEKGENPSRIVYCFGISHEHPGTFILSYIRSTN
PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPLQESVPSIRSVAAMVPMRSPADR
GSSGGSGWGSSHNEGGWKGNSDRSGSGRGGDYRNGGGRDGHPSGAPRPYGGRGRGRGRGR
RDHMNGDRQDGNGDWGNNDTGTGDGGWGSSTGKKSSGAGGWGNESGGGGDGSTGGWGSET
AEKKSDGASGWGNDSGGKKSSEDGGWGNKAGGKKSDGEGGWGNESSSQKSGGGGGGGW
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttattgtagatgaagatgatgggcttggtcatcctaagaggggaggctta
aagaaaaagaaatttagacagggatcagatattagtgctatgcgagatgctaatgaaata
tttggtgatgttgatgaacttttgactattcgcaaaaagggtttggcatctagtgaaaga
atggaaagaaggctcgaagatgagtttgaaccaactgttctctctgagaagtacatgaca
gggcaagatgatgaaatccgccagcttgatattcctgagagaatgcagatatctgaagaa
agcactggaagccctcctgtagatgagcttagcattgaggaagagagtaattggatatat
gcccaatttacttctctacttaaagaatctgatggacaaggagttcatagtttcgaaggg
cgaggtttctcggttaacaaggatgacattgcaaaatttttggagctacatcatgtgcag
aaattagagataccgtttatagcaatgtaccgaaaggagcaatgccggagcttgttggac
actgctgatgttgatggtgccaatcaagacaagaaacctgagactaagtggcataaggtc
ttctggatgattcaggacttggataagaaatggctccttcttcgaaaaaggaaaatggcg
ttgcatggttactatacaaaacgttacgaagaagagtctaggagggtctatgacgaaact
aggcttaatctaaatcagtatctttttgaatcagtcattaagtctcttaacgttgcagaa
acagaaagagaagttgacgatgtagattccaagttcaacttgcattttcctcccggtgaa
attggtgttgatgaagggcagtacaagagaccgaaaagaaaatcacaatatagcatctgt
agcaaagctgggctctgggaggttgccaacaaatttgggtatagtgctgagcaattggga
cttgcattgtccctcgaaaaattggttgacgagcttgaggacgcaaaggaaacaccagag
gagatggcaatgaactttgtgtgcgcaatgtttgaagaccctcatgctgttctgaagggt
gcacggcatatggctgcagttgagataagttgcgagccatcagtcaaaaagtatgtccgt
ggcatttatatggagaatgcagtagtctcaacaagtccaacagcagatggaaatacagta
atagattcattccatcagttttctgggatcaagtggttacgtgaaaagccattgagcaag
tttgagggtgcacaatggcttctcattcagaaggcagaagaggagaaacttcttcaagta
accttcaagctgcctgagaatcacatgaataggctaattagcgactgcaatgaacattat
ctaagtgtcggtgttagtaagtatgctcaactctggaatgagcaaagaaagttaattctg
gaggatgcacttcatacttttcttttgccatcaatggagaaagaagcaagatccttgctg
actagcagagcgaagagtcggttgcttttagagtatggacaggctttgtggaacaaagtt
tctgcagggccatatcaaaagaaagaaatggacattagctcagatgaggaagttgcgcct
agggtcatggcatgttgttggggacctggaaagccaccaaatacgtttgtgatgctggat
tcatcgggagaggtgcttgatgtgctctatgctggatccctcacattacgatctcaaaat
gtcaatgaccagcagcgtaaaaagaatgaccaggatcgtgttttaaagtttatgatggac
caccaaccgcatgttgtggctttaggagctgtcaatttgtcttgtactcgcctgaaggat
gatatttatgaggtcatattccagatggtggaggaaaagcctagagatgttggacatgga
atggatgatttaagcattgtttatgtggatgaatcacttcctagactatatgaaaattct
cgaatctcgggtgaacagctacctcagcagtcagggatcgtgaaacgtgcagttgctctt
ggacgctatctccaaaatccactagcaatggctgccactttatgcggtccaggtagggaa
attttgtcttggaagcttcatcccttggagcattttcttcaggtagacgagaagtacgga
atggttgagcaggttatggttgacataacaaaccaggttggaatcgacattaatttggca
gctagccatgagtggtttttttctcctttacagttcatttctggacttgggcctaggaaa
gctgcatccttgcagaggtcgcttgtgagagctggttcaatatttgttcgcaaggacctg
ataatgcatgggcttggtaaaaaggtttttgtaaatgcagccggtttcttgcgcattcgc
aggagtgggctagctgctagtagcagtcaatttattgacttattggatgacacccgaata
catcccgagtcatatagccttgcccaagaattggctaaagatatttatgatcaggatgtc
agaggtgactcaaatgatgatgaggatgcgatagagatggcaatagagcatgtgagagat
cggccaggctcattgagaaaagtggtccttgatgagtatcttgccagcaagaaaagggag
aataagaaggaaacctatagtaatatcatgagagaattgagctttggtttccaggattgg
cggataccctttaaagacccaagtccagatgaagaattttatatgatttcaggtgaaact
gaagacaccatagctgagggaagaattgtgcaggctagtgttcggagattacagggtgga
agagccatatgtgtattagattctgggttaactgggatgcttacgaaggaagatttcgca
gatgatgggagagatattgttgagttatcggaacgactgaaagaaggcgatatcctgaca
tgcaagatcaaatcaattcaaaagcagaggtatcaggtgttccttatttgcaaagaaagt
gagatgagaaacaacagacaccagcataaccagaatgtggatgcttactaccatgaggat
agaaacagtctccagcttgtaaaagagaaagctcgaaaggaaaaagagctagtgaggaag
cattttaagtcccggatgattgtccatcctcgctttcagaatatcactgctgaccaagct
acagagtatttgtctgacaaagactttggagaaagcattgttcgtccaagttctcgagga
ctcaattatttaactttgacgctcaagatttatgatgaagtttacgctcacaaggagata
gttgaaggtgggaaagaaaacaaggacatcactagcctacagtgtattgggaaaaccctg
aaaattggagaggacaccttcgaggatctggatgaggtcatggatcgatatgttgatcct
ttggtatctcatcttaagaccatgctcaactatcggaaattccgaaaggggaccaaatca
gaagtagatgatcttctgaagatcgagaagggcgaaaatccttcaagaatagtttactgc
tttgggatttctcatgaacatccaggcacctttatactgtcttatataaggagcacaaat
ccacatcatgagtatataggcttatatcctaagggatttaagttcaggaaaaggatgttt
gaggacattgataggcttgtggcatacttccagaggcatattgatgacccattgcaggag
tcagtgccatcaatccggtctgttgctgccatggtaccaatgagaagcccagcagaccgt
ggctcatctggaggaagtggttggggtagttctcataatgaaggaggctggaaaggaaac
tcagatcgctcaggctcagggaggggtggtgattacagaaatggtggtggacgtgatggg
catccaagtggagcgccaaggccatatggtggtcgcggtcgtggtcgaggcagaggacga
agagatcatatgaacggtgatagacaagatgggaatggagactggggtaataacgatact
ggaactggagatggaggttggggaagtagtactggtaaaaagagcagtggtgcaggtggc
tggggtaatgagtctggtggtggtggtgatgggagtactggtggttggggaagcgagact
gctgagaaaaagagtgacggtgcgagcggctggggaaatgattctggcggtaaaaagagc
agtgaagatggtggttggggaaacaaggctggtggtaaaaagagcgatggagagggcggt
tgggggaatgaatccagcagtcaaaagagcggtggcggcggtggtggtggatggtga
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integrated database retrieval system
