Camelina sativa (false flax): 104750443
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Entry
104750443 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104750443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104750443
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104750443
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104750443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
104750443
NCBI-ProteinID:
XP_010470534
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All DBs
Position
16:complement(13101093..13103415)
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AA seq
425 aa
AA seq
DB search
MAGEASSSRPKRQRVPSIAQSVLPDGGEEEDAVEVERSGTLFELDLLDCPICCVTITSRI
FQCDNGHVACLSCCVKMKKKCSACTLPIGKYRCRRMERVVEAVVVSKFKRGYTAVVKKKI
QSFAGEASSSGRKRQRVPLVFEEECETGGAGDLVVRPGTLFELDLLDCPVCCDALTDHIF
QCDNGHIACSSCCTKLRHTCPSCTFPIGINRCRIMEKIVKAIIVPCPNAKHGCTETFSYG
KELAHEKKCSFVLCYCPALNCNYSGLYKNLYSHYAANHKDTDKRFRYGYSHHVYLDIETK
ISVLQEYADGPLVVVQCFKEPQGMYFTVNCIAPPSPGVGKFSYDISYSTAGNSMTFTSSK
MNKLPEVSFQTPKKDFMLVPDYLFDPRFLLKHMRICIRSLEEEDDDNYDEEDAEEEEDDD
DEDED
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccggagaagcatcgagcagccgtccaaaaaggcaacgagtaccttccattgctcaa
tccgtactcccagatggtggtgaagaagaagatgcggtggaagtggaacgatctgggacg
ttgttcgagttagatcttctcgactgtccgatttgttgcgtcacaatcacgagccgtatc
tttcagtgtgacaatggacatgtagcgtgcctttcttgctgtgtaaaaatgaagaaaaaa
tgctctgcttgcactttgcctattggtaagtatcgatgtagaagaatggagagagttgtt
gaagcagtcgttgtctcaaagttcaaacgtggctacactgcggtggttaaaaagaagatc
caatccttcgctggagaagcgtcgagcagcggccgaaagaggcaacgagttcccttagtt
tttgaagaagaatgtgagactggtggtgcaggggatttggtggtacggcctgggacgttg
ttcgagttagatcttctcgattgtcctgtttgctgtgatgcactcacggatcatatcttt
cagtgtgacaatggacacatagcttgttcttcttgctgcacaaaactgaggcacacatgc
ccttcctgcactttccccattggtatcaatcgatgcagaataatggagaaaattgttaaa
gcaatcattgtcccttgcccaaacgccaaacatggttgtaccgagacattctcttatggc
aaagaattagcccacgagaagaaatgcagcttcgttctgtgctactgtcctgcactgaac
tgcaactactcgggcctgtacaagaatctctacagtcattacgctgctaatcacaaggac
actgacaaacgcttcaggtatggctattcccatcatgtatacttggacattgagacgaag
atttcggtccttcaggaatatgcggatggtccattggttgtggttcagtgtttcaaggaa
ccacaaggaatgtattttactgtgaactgtatagcacctccttctccaggagttggaaag
ttctcgtatgatatatcctactcgacggcaggtaactctatgacatttacatcttcgaag
atgaataaattaccggaagtgagcttccaaactccgaagaaggactttatgttagttcct
gactatctcttcgatccgaggtttttgttgaagcatatgcgcatctgcatccgcagccta
gaagaagaagatgatgataattatgatgaagaagatgcagaagaagaagaagatgatgat
gatgaagatgaggactaa
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