Camelina sativa (false flax): 104750583
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Entry
104750583 CDS
T05044
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104750583
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104750583
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104750583
NCBI-ProteinID:
XP_010470701
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Position
16:14638719..14640631
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AA seq
408 aa
AA seq
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MRMTLVHLSLSLFSCLLLVLSPTFIASTPVSHPDLVVQEVNEKINASRRNLGVLSCGTGN
PIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDAVNPKPGTLRHA
VIQDEPLWIIFARDMVIKLKEELLMNSFKTIDGRGVNVHIAGGACITVQYVTNIIIHGIN
IHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGST
AITISNNYLTHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNN
DYTHWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPQSKWKKWNWRSEGDLFL
NGAFFTASGGRASSSYAKASSLSARPSSVVASVTGSAGALFCKKGSRC
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgacacttgttcacttgtctctctccctcttctcatgtctcctcctagtcctt
tctccgaccttcattgcctccactcccgtctcccaccctgacctcgttgttcaagaagtt
aacgagaagattaatgcgtctaggaggaatctaggcgtgctctcatgtgggaccggaaat
ccaatagacgactgttggagatgcgacccgaaatgggagaaaaacagacaacggctagcc
gattgcgctattggttttggcaaacacgcaatcggcggccgtgacggcaaaatctacgtg
gtgacggattcgagcgacaaagacgcggtcaaccctaaacccggaacactaagacacgcc
gtgatccaggacgagccgctttggatcatctttgctcgtgacatggtcataaagctaaaa
gaagagcttttaatgaactctttcaagaccatagacggacgtggagttaacgtccatatc
gctggtggcgcgtgcatcacggttcagtacgtgaccaacatcatcatccacggtatcaac
atccacgactgtaaacgaaagggtaatgcttacgttagagactctccgtcgcattatggg
tggaggacggcctccgacggtgacgccgtctcgatttttggtggctcacacgtgtgggta
gaccactgctcgttgtcgaactgcgctgacggtctgatcgacgctattcatggatcaacg
gccattacgatctctaacaactacttgacgcaccacaataaagttatgcttttgggacac
agtgattcgtacacgagagacaagaacatgcaagtcaccattgccttcaatcactttggt
gaaggtcttgttcagagaatgccaagatgtagacatggatattttcatgtggtgaataat
gattatacacattggcaaatgtatgcaattggtgggagtgcagccccaacgattaatagt
caaggcaataggtttcttgctcctaacgatcatgtctttaaagaggtgactaagtacgaa
gatgccccacaaagcaaatggaagaaatggaattggaggtcagaaggtgatttgttccta
aacggtgcctttttcacggcttcgggtggaagagcctcttcaagctatgctaaggcttcg
agtttgtcggctagaccgtcctcagtagtagcttcagtcacgggcagtgctggtgcactc
ttttgtaaaaagggatctcgatgttaa
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