Camelina sativa (false flax): 104750975
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Entry
104750975 CDS
T05044
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A-like isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104750975
Membrane trafficking [BR:
csat04131
]
Protein recycling
Others
EARP complex
104750975
Endosome - Golgi transport
Tethering complex
GARP complex
104750975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
SPG48
PWI
Motif
Other DBs
NCBI-GeneID:
104750975
NCBI-ProteinID:
XP_010471137
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All DBs
Position
16:17824792..17831776
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AA seq
708 aa
AA seq
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MSDISIDALGQAMGDFSNHEKHGFDLGAFVGDLAFEEDSGSEDISLEGLQQELEECQSDE
VVSNILSSGAKLRDYAKGVENNLRKVELDSIEDYIKESDNLLSLHDQIRDCDSILSQMET
LLSGFQEEIGSISSDIKILQEKSMDMGLRLKNRRVAESKLAKFVEDIIVPPKMIDVIVDG
EVNEEYMKTLEILSKKLKFVEADQAVKSSKALKDVEPELEKLRQKAISKVYDFIVQKLIA
LRKPKTNIQILQQSVLLKYKYIISFLKEHGKEVFMDVRAAYIDTMNKVLSAHFRAYIQAL
EKLQLDIATAYDLIGVETRTTGLFSRAREPLKNRSAVFALGERIKIIKEIDQPALIPHIA
EASSLKYPYEVLFRSLHKLLMDTATSEYIFCDDFFGEESIFYEIFAGPFSVIDEHFNPVL
SNCFDAIGLMLMIRIIHHHQLIMSRRRIPCLDSYLDKVNISLWPRFKMVFDSHLSSLRDA
NIKTLWEDDVHPHYVMRRYAEFTASFIHLNVEYGDGQLDINLERLRMAVDGLILKLAKLF
PRPKQQIVFLINNYDMTIAVLKEAGPDGGKIQMHFEELLKSNTSLFVEELLVEHFSDLIK
FVKSRASAEDSSSNPERSITIAEVEPLVRDFGSRWKTAIELMDKDIITSFSNFLCGMDIL
RAALTQLLLYYTRLTDCIKKIDGGSALNRDLVSIQSIMYEIRKYSKTF
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacatttccattgacgcattgggccaagcaatgggtgactttagtaatcatgag
aaacatggatttgatttaggagcatttgttggggacttggcttttgaagaagattcaggc
agtgaggatatatcattggaaggtcttcaacaagaactagaagaatgtcaaagtgatgag
gttgtttccaatatactatccagtggtgccaaacttagagactatgcaaaaggtgtagag
aacaatctacggaaggttgaattggattcaattgaggattacataaaagaaagtgataat
ctactctcacttcacgatcagattcgtgactgtgacagcatcctctcacaaatggaaact
ctcctcagtggatttcaggaagagattggttctataagttcagacataaagattctccaa
gaaaaatcaatggacatgggtttgagattgaaaaaccgcagggtggctgaatcaaaacta
gcaaaattcgttgaagacatcatagtgccaccaaagatgatcgatgtaattgttgatgga
gaggttaatgaagagtatatgaaaacgcttgaaattctgagtaagaagctgaaatttgta
gaagcagatcaagcagttaaaagctcaaaagctttaaaagatgtagagcctgagctcgaa
aagctccggcaaaaagctatttccaaggtgtatgattttattgtccagaagcttatagcc
cttaggaaacccaaaaccaacattcaaattcttcaacagagtgtgttattaaagtacaag
tatattatctccttcctcaaagaacatggaaaagaagtgtttatggatgtccgtgctgca
tatattgataccatgaacaaggtgttaagtgcacattttcgtgcttatattcaagccctt
gagaagctacagttagatatagccacagcatatgacttgattggggtggagactagaacc
accggcctcttctccagagcaagggagccactaaagaaccgttctgccgtttttgctttg
ggtgagaggataaaaattataaaggaaattgatcaacctgctttgatccctcacatagcc
gaagccagctcgctcaaatatccttatgaagtgctcttcaggagcttgcacaagctactt
atggatacagctacttctgaatatatattttgtgatgatttctttggtgaagagtccata
ttctatgaaatctttgcaggtccattctctgtcattgatgagcacttcaatcctgttctt
tcaaactgttttgatgctatcggcctgatgcttatgattcgcataatacaccaccaccag
cttataatgtctcggcggaggattccatgcctggattcatatctggacaaggttaatatt
tcattgtggcctcgtttcaagatggtgtttgactcacacctcagcagtctgcgagatgca
aacattaagacattatgggaagatgatgttcatccacactatgtgatgaggcgttatgct
gaattcacggcttcgtttattcacctgaatgtcgaatatggagatgggcagcttgatata
aatctggagcggttaagaatggctgtagatggcttgattctcaagcttgcgaagttgttc
ccaaggccaaagcagcaaattgtgtttctcataaacaactacgatatgacaattgctgtg
ctgaaggaagcgggaccagatggtgggaaaattcaaatgcattttgaggaattgctaaag
agcaacacttcgttatttgtggaagaactgctggtggaacatttcagtgatttgataaaa
tttgtgaaaagtcgagcttcagctgaggattcaagttcaaatccagagaggtccataaca
attgctgaagtagagccactggtgagggactttggaagcagatggaagacagcgattgag
ttgatggacaaagatatcataacttcgttcagtaacttcttgtgcggtatggatatcttg
agagctgcattgacacaactattactctattacacaagactcacagactgcatcaagaag
atagatggtggatctgctctgaacagggatcttgtctccattcaatctatcatgtacgag
atcaggaaatactccaagactttttga
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