Camelina sativa (false flax): 104751018
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Entry
104751018 CDS
T05044
Name
(RefSeq) cleavage stimulating factor 64-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104751018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104751018
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
104751018
U7-dependent histone pre-mRNA processing factors
104751018
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
partial_CstF
DUF8400
Motif
Other DBs
NCBI-GeneID:
104751018
NCBI-ProteinID:
XP_010471188
UniProt:
A0ABM0WHK8
LinkDB
All DBs
Position
16
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AA seq
459 aa
AA seq
DB search
MASSSQRRCVFVGNIPYDATEEQLRDICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEE
TALSARRNLQSYEINGRQLRVDFAENDKATDKTRDQGQGGPGLPATTESQKQIGGPVDSN
IHQPVGLQLAITAASVMAGALGGPQVGSQFTQSNLQVPASDPLTLHLAKMSRSQLTEIIS
SIKVMATQNKEQARQLLVSRPQLLKAVFLAQILLGIVSPQVLQTPNIVQAPSHMTGSSNQ
DTQLSSGQNLLPPLAQRPQQQSRPPHSQFPVQQSSKQPFSQIPQLVAQPGPSSVNPPSRS
QVKVLSETAPFQRQQVVPASVNVGYSSQTSVPNTVIQPSQVPRPALTNSVMQQGGQTVSL
NYGKRINEGPHQSMNRPLKMMKVEERRTTSLPGGHASNSMLPNQVQAPQTQISPDVQSTL
LQQVMNLTPEQLRLLTPEQQQEVLKLQQALKQDHMMQPS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcatcccaacgacgctgcgtttttgttgggaacatcccttacgacgcgacg
gaggaacaactcagagatatttgtggagaggttggacctgttgtctcgtttagattagtt
acggatagagaaactggtaaacctaaaggctacggcttttgtgagtataaggacgaagaa
acggcgttgagtgctcgtcgtaatcttcagagttacgagatcaatggccgtcagttaaga
gttgatttcgctgagaatgacaaagccactgacaaaacccgtgatcagggtcaaggagga
cctggtttgcctgctactacagaatctcaaaagcagattggagggcctgtagattcaaat
atacatcagccggttggtctccaacttgctataactgctgcatctgttatggcgggtgca
ctaggtggtcctcaggtcggttcgcagtttacacaaagtaatctgcaggttccagcgagt
gatcccctgactcttcatcttgccaagatgtctagaagtcagcttactgaaattatatcg
tccattaaggtaatggctacacagaataaggaacaagctcgacagttgttggtttcaaga
cctcagttactaaaagctgtttttctggcgcagatactgcttgggattgtgagtccacaa
gtgttgcagacgccaaatattgttcaagccccaagtcatatgacagggtcttcaaatcaa
gacacgcaattatcatcaggtcaaaaccttttaccgccacttgcacaaaggccgcagcag
cagagtcgccctccccatagtcagtttcccgttcaacagtcttctaaacaaccttttagt
cagattccacaactagtagcacaaccaggtccttcttctgtgaatcctccttctagatcc
caagttaaagttctcagcgaaaccgctccattccaacgccaacaagtggttccagcttcc
gtcaacgtaggttatagtagtcagacttcagttccgaatactgttatccagccatctcaa
gtaccccgcccagcattaacaaattctgtgatgcagcaaggtgggcaaactgtatcttta
aactatggcaaaagaataaacgagggtcctcatcaatcaatgaacagaccattaaagatg
atgaaagtggaggaaaggagaaccacttcactccctggaggtcatgcgtctaattcaatg
cttccgaatcaagtacaagctccccagacacagatctcccccgatgtccagtcaacattg
ctccagcaagtaatgaaccttacaccagaacagctgagattgctgactccagagcaacag
caagaggtcttaaagctgcaacaagcgctcaagcaagatcatatgatgcagccttcatag
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