Camelina sativa (false flax): 104751042
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Entry
104751042 CDS
T05044
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104751042
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104751042
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104751042
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-rbx1
MFS_2
Motif
Other DBs
NCBI-GeneID:
104751042
NCBI-ProteinID:
XP_010471219
UniProt:
A0ABM0WHN4
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All DBs
Position
16:18183038..18185494
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AA seq
449 aa
AA seq
DB search
MMNRALVLLLLLHVFTVSCLASAKVILIRNNLTLSFDDIEANFAPSVKGTGEIGVVYVAE
PLDACQNLMNKPEQKSSNETSPFVLIVRGGCSFEEKVRKAQRAGFKAAIIYDSEDHGTLI
AMAGNSGGIKIHAVFVTKETGEALQESAGFPDTKVWLIPSFENSAWSIMAVSFISLLAMS
AVLATCFFVRRHRIRRRTTSRSSRVREFHGMSRRLVKAMPTLIFSSFHEDNTTAFTCAIC
LEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSS
AGSSFNSSSLHSSVRSSALLIGPSMGSLPSFSPAYASSSYIRQSFQSSSNRRSPPISVSR
SSVDLRQQGASPSPSPSPSYISHMASPQSLGYPTISPFNTRYMSPYRPSPSNASPALPGS
SNYQFHPLRYSESAGTFSPYASANSLPDC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcgtgctttggtcctactactacttttacacgttttcactgtttcttgttta
gcttcagccaaagttattctcatcaggaacaacctcactctctctttcgatgacatcgaa
gctaattttgctccgtcagtgaagggtacaggtgaaattggagtggtttatgtagctgag
cctcttgatgcttgtcagaatctaatgaataaaccagagcaaaagagctctaatgaaact
tccccttttgtgttgattgtaagaggaggctgtagttttgaagagaaagtgagaaaagct
cagagagctggttttaaagctgctattatctatgacagtgaagaccatggaaccttgatt
gcaatggcaggtaactcgggtggtataaagattcatgctgttttcgttactaaagaaacg
ggagaagcgttgcaggagtctgctggtttccccgatacaaaagtttggttgattccaagt
tttgagaactctgcttggtcgatcatggcggtttcattcatttcgttgctagcaatgtct
gctgttctcgctacttgtttctttgtccgtaggcatcgtattagaaggcggacaacatct
cggtcctctcgagtccgtgagttccacggtatgagccgccgattggttaaagcaatgccg
actctcatattcagttcttttcacgaagacaacactactgcattcacttgtgctatttgc
ctcgaagactacactgttggagacaagcttaggctcttaccttgctgccacaagtttcat
gctgcttgtgttgactcgtggttaacctcttggagaacgttctgtccagtatgcaaacga
gatgcaagaaccagcacaggcgagcctccagcttcagagagcacgccattgctctcatcc
gctggatcgtctttcaactcttcctctctacactcttccgtcagatcatccgcgctattg
atcggtccttccatgggctcattaccttctttctctcccgcatacgcgagctcatcatat
atcagacaatctttccagtcttcctctaaccgtagatctcctccaataagcgtaagccgt
agctctgtggatctcaggcaacaaggagcttctccatcaccatcaccatcaccatcatac
atttcccatatggcttctccacagtcactgggttaccctactatctcccctttcaacacg
aggtacatgtcaccctacaggcctagtccgagcaatgcgtcacctgcattgcctggatca
tcgaattatcagttccatccactacgttacagtgaatcagccggaactttctctccatac
gcctctgcaaactcgcttcccgactgttaa
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