Camelina sativa (false flax): 104751058
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Entry
104751058 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104751058
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104751058
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104751058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-C3HC4_4
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
104751058
NCBI-ProteinID:
XP_010471236
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Position
16:18292367..18294167
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AA seq
182 aa
AA seq
DB search
MNSPPENDLCSICHSHFTAPCQANCSHWFCGDCIMLVWTHGSTLLPCKCPLCRRPISLLV
PSEDTIRDRSVAEVLGKLETYNRLFGGHSSSLVQRMQDLPFLLRRLLREMMDPQRTLPLV
IRARVYIAMFLSAIYIVSPIDIIPEGVLGIVGLLDDLLIALICFLHVAALYRSVLYFRHA
GS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtccaccggagaacgatctttgttcgatatgtcattcccacttcaccgctcct
tgtcaagccaattgctcccattggttctgcggagattgcattatgctggtgtggacgcat
ggatctacattactgccatgtaaatgccctttgtgtcgtcgtccaattagtttactggtt
ccttcagaggacacaatcagagaccgttcagttgcggaggttcttggtaagcttgaaacg
tacaacagactctttggcgggcattcaagtagtttagttcagaggatgcaagaccttccc
ttcttactacgaaggttgttgcgggaaatgatggatccacaaagaacgcttccacttgtc
attagagctcgggtttatatcgcaatgtttctcagtgctatttacatagtcagtccaata
gatatcattccagaaggagttttggggatagtcggtttgcttgatgatcttctcatagcc
ctgatttgtttcctccatgttgctgccctgtaccgctctgttctctacttccgtcatgcc
ggttcatga
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