KEGG   Camelina sativa (false flax): 104751228
Entry
104751228         CDS       T05044                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104751228
Spliceosome [BR:csat03041]
 Complex B
  Other components
   Complex B specific factors
    104751228
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_Vps41 Ge1_WD40 Beta-prop_SCAP Beta-prop_Nup120_160 Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 DUF7165 Beta-prop_WDR35_TULP_N VPS8_N Beta-prop_HPS5 PQQ_3 Mala_s_1-like Beta-prop_NOL10_N zf_topless Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 104751228
NCBI-ProteinID: XP_010416190
LinkDB
Position
7:22954526..22959190
AA seq 512 aa
MALEIEARDVIKIMLQFCKENSLNQTFQTLQSECQVSLNTVDSVETFISDINSGRWDSVL
PQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRMEHL
LVRSYFDPHEAYGDSTKERKRAQIAQAVAAEVTVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDVDDTYPNVLSHTIKFGKKSHAECARFSLDGQFLASSSVDGFIEVW
DYISGKLKKDLQYQAAETFMMHDDPVLCIDFSRDSELLASGSQDGKMKVWRIRTGLCIRR
FDRAHSQGVTSLSFSRDGSQLLSTSFDHTARIHGLKSGKLLKEFRGHTSYVNNAIFTSDG
SRVITASSDCTVKVWDSKTTDCLQTFKPPPPLRGNDASVNSVHLFPKNIEHIVVCNKTSS
VYIMTLQGQVVKSFSSGKREGGDFVAACVSTKGDWIYCIGEDKKLYCFNYQSGKLEHFMM
VHEKDVIGVTHHPHRNLLATYSEDGTMKLWKP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggcgctcgaaatcgaagctcgagatgtaataaagattatgcttcagttctgcaaagag
aactccttgaatcagacgttccagacattacaaagcgaatgtcaggtttcgttaaataca
gtagacagcgtcgaaacgtttatctctgatattaatagtggaagatgggactctgtacta
cctcaagtttctcagcttaagcttcccaggaataagcttgaagacctttatgaacagatt
gtgttggagatgatagagcttcgagaattggacactgcccgagctattttgaggcaaact
caggtgatgggtgtcatgaaacaggagcaaccagagagatatctgcggatggagcatctt
ctagtcagaagctattttgatccgcatgaggcttatggagactcgactaaagagagaaaa
cgtgcacagattgctcaagctgtggctgccgaggttactgtggtaccaccttcacggtta
atggctttgataggtcaggctttaaagtggcaacaacatcaaggcctactccctccagga
actcagtttgacctctttcgtgggacagcagctatgaaacaagatgtagatgatacatat
cctaatgttcttagtcatacaataaagtttggtaaaaagagtcatgccgaatgcgctaga
ttttcactagatggacagtttcttgcatcttcatctgttgatggtttcattgaggtatgg
gattacattagtgggaagctgaagaaggatttgcaatatcaagctgctgaaactttcatg
atgcatgatgaccctgtcctatgtatagactttagcagggattcagagctacttgcgtct
gggtcacaagatggaaagatgaaagtctggcgtataaggactggtctatgcattcgtcgt
tttgaccgtgcacattcccaaggagttacaagtctgtccttctctcgggatggaagccaa
ttactgagtacctccttcgaccacaccgcaagaatccacggcttaaaatctgggaaattg
ttgaaagaatttcgcggtcatacatcttatgtaaataacgccatctttacaagtgatgga
agccgtgtaatcactgcctccagtgattgtacagtgaaggtctgggattcaaagacgaca
gattgtctacaaacatttaagccgccacctcctttacggggaaatgacgcatctgtcaat
tctgttcatctattccctaaaaacatagaacacatcgttgtgtgcaacaagacatcatca
gtatacatcatgacgctccaaggacaggttgtgaagagtttctcatccggtaagagggaa
ggaggagattttgtagctgcatgtgtatctacgaaaggagattggatatactgcatcggc
gaagacaagaaattgtactgcttcaactatcaatccgggaaacttgagcatttcatgatg
gtgcatgagaaggatgtgattggtgtaacacaccacccgcatagaaatctccttgctacc
tatagtgaagatggcacaatgaagttatggaagccttga

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