Camelina sativa (false flax): 104751616
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Entry
104751616 CDS
T05044
Name
(RefSeq) SNW/SKI-interacting protein
KO
K06063
SNW domain-containing protein 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104751616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104751616
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19-related factors
104751616
Complex C
104751616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Ribosomal_S8
Motif
Other DBs
NCBI-GeneID:
104751616
NCBI-ProteinID:
XP_010471904
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Position
16:complement(21192095..21194576)
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AA seq
611 aa
AA seq
DB search
MTPLKDLLPDPKSTTTTHYDHSNDPWFKNRFVENEAEKSATIIFKVVPVYLKRQGFRPKN
PEDFGDGGAFPEIHLAQFPLGMGRNKSNKPGAKTLPVTVDAQGNVVFDAIVRQNENSKKI
VYSQHKDIIPKILKDEGYLDTVLDEEEELQKEIQETAEETKAAIEKIVNVRLSAAQPSNV
ARQSGESKYIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLDPPKFKHKRVPKASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLS
EALYVAEQKAREAVSMRSKVQKEMSMKEKERKEQELRALAQKARSERTGAAVSMPVSSDR
GRSESVDPRGDYDNYDREREREREREGPKETREEREERIQREKIREERRRERERERRLEA
KDAAMGKKSKITRDRDRDISEKVALGMASTGGKGGEVMYDQRLFNQDKGMDSGFVADDQY
NLYDKGLFTAQPTLSTLYKPKKDNDEEMYGNADEQLDKIKNTERFKPDKAFTGASERAGT
KRDRPVEFEKEEENDPFGLDRWVSDLKKGKKPLDKIGSGGTMRASGGGGSSSRDDHGGSG
RTKINFERSGR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctcttaaagaccttttacctgaccccaaatcaaccactaccacgcattatgat
cattctaatgatccatggttcaaaaaccgtttcgttgaaaacgaggccgagaagtccgca
accatcatctttaaagtggtacctgtttacctgaaacgtcaaggtttccgtcccaagaat
cctgaggattttggtgatggtggtgctttccctgagattcatcttgctcagtttcctctt
ggtatgggtaggaataaatcaaataagcctggagccaagactctccctgttactgtcgat
gctcagggtaacgttgtctttgacgccattgtgaggcagaatgagaactccaaaaagatt
gtttattctcagcataaggatattattccaaagattctcaaagacgaggggtacttggat
actgtattggatgaagaggaggaattgcagaaggagatacaggagactgctgaggaaaca
aaagctgccattgagaagattgtgaatgtgagactcagtgcagcgcagcctagtaatgtg
gcaaggcagtcgggtgagtccaagtacatcaagtataagccttcccagcaatctgcagcg
ttcaattccggtgctaaagagaggattattaggatggtggagatgcctgtagacccactt
gatccaccaaagttcaagcataagagagtcccaaaggcttctggttctccgcctgttccg
gtcatgcattcaccgcccaggcctgttaccgtcaaggaccaacaagactggaaaatccct
ccttgcatctcaaattggaagaatccaaagggttacacaatccctcttgataaacgtcta
gctgctgatggaagaggcctacaggacgttcagatcaatgataactttgccaagttatca
gaggcgctctatgtagctgagcagaaagctagagaggctgtttcaatgcgttcaaaggtg
caaaaagagatgtcaatgaaggagaaggaaaggaaagagcaggaattgagggctcttgcc
caaaaagctcgctctgaaagaactggtgcagctgtgagtatgcctgtttcatcggacagg
ggtaggagtgaaagtgttgacccaaggggtgattatgacaactatgaccgggagagagaa
agggaaagagagagggaagggccaaaagagactagagaggaaagggaggaacggattcag
agagagaagatccgagaagagcgtcgtagggaaagagagagggagagaaggttggaagct
aaagatgctgccatgggcaagaagagcaagatcacaagagatagagaccgtgatatcagt
gagaaagttgctcttggaatggcatctactggagggaaaggtggtgaagttatgtatgat
caacggctgtttaaccaggacaaaggaatggactctggattcgttgctgatgaccaatac
aatttatatgacaaaggcttgtttactgcacaacccactctttcaacgctgtacaagcca
aagaaggataacgatgaagaaatgtatggaaacgcagatgaacagctcgacaagatcaag
aacactgagaggtttaaacctgacaaagctttcacaggggcttccgagagggctggtacc
aagagagaccgacctgttgagtttgagaaggaagaggaaaatgatcctttcggtctagac
aggtgggtttctgatttgaagaaaggtaagaaacctttggacaaaatcgggtctggagga
actatgagagcaagtggcggtggtggtagctcgtcaagggatgaccatggcggatctggt
cgaaccaagatcaatttcgaacgcagtggccgttga
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