Camelina sativa (false flax): 104751627
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Entry
104751627 CDS
T05044
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104751627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csat03032
]
104751627
03400 DNA repair and recombination proteins [BR:
csat03400
]
104751627
DNA replication proteins [BR:
csat03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104751627
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104751627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
ECT2_BRCT0
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
104751627
NCBI-ProteinID:
XP_010471922
LinkDB
All DBs
Position
16:21267925..21274616
Genome browser
AA seq
1067 aa
AA seq
DB search
MKTTQLFKGSNVFMSRNLVPPEVFDTLLDAFKLNGAEIFLCCDPSRSGPSDFHVIASPDH
EKFKDLKAKGCNLIGPQCALSCAKEGRPLPQGGFTCCLAMDGLKVLASGFLMDEKVKIRE
LVTSMGGVFLSKSSSDVNFVIVKNVLAAKYKWALNTQKKPVVTLNWLHQCWTEHRVVPQE
PYKVPPFSGLTICVTRIPGDERKGMEKVISEYGGSYSGELTRSCTHLIADAAEGDKYKVA
RKWGHIQIVTRKWFQQSIDRKVCLSEESYPVLSSIPLARGLRDIGIHHNVQEKFPLPTAV
SVSVADSYASCAQSRDSDIEASASQNIFSTSMNPSTDVKEPSEGPHTRPQEQDIDGCTAR
DSESEDNDLYLSDCKFFLLGFEASEMRRLVKLVRRGGGSWYMLLNERMTHIVVGTPSESE
KREVRSIAASGVVQVVTPSWLEDCDREKKEIPVHKIYIANHLILPRDSAYLTKGSFDSSS
RSINVSNGPATSLGSKEAVQEFARKDEIHAERKIVSPKQKETLISPVTSKRKEQQSNQCE
FNGQNVNETMSSVFKGKTFCFSHSFPEDRRPEILEWVNQGGGEVVVNDPLINSADFTIES
HGGFRSAWTTQISYVSSHWVRSCLEDGCLLAVSSHIVYSPLPCQTPLPGFERFCICSSQH
DDKDIKLLSNLCYVLGAKFLKKLTKKVTHLLCHYANGRKYETASKWGIVSVTPDWVYECV
RQNQVVSPDNFHPKELTTQDREAGSGASQFHTHFLPMSSRDNVSLLVSHSDEREYIQDFS
GKNGKGEVSNRLGEAGREQTFPSKKAKLFKDGQESDVSLLVSHSEEREYIQDFSGKNCKG
EVNNRLGEAGREQTFPSKKAKLFKDGQESHVSLLVSQSEEREYIQEFSGKNGKGEVNNRL
GEAGREQTFPSKKAKLFKDGQERHVFSVGEPPSNCDRPSKSGEGNVSGNDTASSREDPDV
ADTIEDLVEQASKFQDQKSPGRISEKTLFSTSEQYNTGNHSVTGLSRHWINRVHKNDDMG
SPPGKVTTGTYGNFSETQTESQVVSYEEDLSGRQMLIDRVRTRSSIT
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgacgcaactatttaaaggttccaacgtctttatgtctcggaatctggttcct
cctgaagtcttcgatacacttctcgatgctttcaagctcaacggtgccgaaatcttcctc
tgctgcgacccctctcggagcggtccctccgattttcatgtcatcgcttctcccgatcat
gagaaattcaaggatcttaaagccaagggttgtaacttgattggtccgcaatgtgccctc
tcctgtgcaaaagagggtagaccgctgccacaagggggattcacttgttgcctagcgatg
gatggtctgaaagttcttgcttctggtttcctgatggatgagaaggtcaagatcagagag
ttggttacttccatggggggagtgtttctttccaaatcttcttctgatgtcaacttcgtc
attgtcaaaaatgtcttggctgctaagtacaagtgggctctgaatactcagaagaagcca
gttgttacactgaattggttacatcagtgttggaccgagcaccgtgtggttccccaggaa
ccatataaggttcctcctttttctggattgacaatctgtgtcacaagaattccaggagat
gagcgtaagggaatggagaaggttatttcagaatatggagggagctactctggtgagcta
acaaggagttgtacacatctgatcgctgatgctgctgaaggtgacaaatacaaagttgct
cgaaaatggggtcacattcaaattgtcacacggaaatggtttcagcagtccatcgataga
aaagtctgtctcagtgaggagtcatatcctgttcttagttccatacccttggcacgaggg
ttgcgtgatataggaatccatcataatgttcaagaaaagtttcctttgcccacagctgtg
tctgtgtctgtggcagattcatatgcttcttgtgctcagtctagagactcagatatagaa
gcttctgcctcacaaaatattttttccacttccatgaaccccagtaccgatgttaaagaa
ccaagtgaaggcccacatacaaggccgcaagagcaagatattgatggttgtactgccaga
gattcagaatcggaagacaatgacctgtacttatcagattgtaaattttttctgcttggt
tttgaagcttctgaaatgcgtagacttgttaagttggtccgtagaggtggtggatcctgg
tatatgctgcttaacgaaagaatgactcatattgttgttggaactccttcagagagtgag
aaaagagaggtgaggagtattgcagcttctggtgtcgttcaagtagtcacacccagttgg
cttgaagattgtgatcgtgagaaaaaagaaattccagttcataaaatatatattgctaac
cacttgattcttccaagagattctgcatacttgaccaagggatcatttgattcatcttca
aggagtatcaatgtttcaaatgggccagcaacttctctgggaagtaaagaagcagtgcag
gaatttgccaggaaagatgagattcatgcggaaaggaaaatagtatcacccaagcaaaaa
gaaacacttatttcccctgtaactagtaaaagaaaagaacagcagagtaatcaatgtgaa
ttcaatggtcaaaacgtgaatgaaacaatgtcatctgtatttaaggggaagacattttgt
ttctcgcattcttttcctgaagatcggcgacctgaaatcttggaatgggtgaatcaaggt
ggaggagaagtggtggtgaatgatcctttgataaatagcgcagattttactattgaatcc
catggtgggttccgaagtgcctggactacccaaattagctatgtctcaagtcattgggtt
cgatcttgtttagaggatggttgtttacttgctgttagtagtcatatcgtctactcacct
cttccatgccagacacctttgcctggattcgaaagattttgcatttgtagttcccaacat
gacgacaaggatataaaactcctgtcaaatttgtgttatgtacttggagcaaaatttttg
aaaaaactaaccaagaaagtgactcacttgctatgccactatgctaacggacgtaagtat
gagacagcttccaaatggggaatagtttccgtgacacctgactgggtttatgaatgtgtt
agacagaatcaagttgttagtccagacaacttccatccaaaggaattgacaactcaagac
agagaagcaggttctggcgcaagtcaatttcatacacattttttgccaatgtcctcgagg
gacaatgtgtctctacttgtaagccactctgatgagagggaatatattcaagatttttct
ggcaaaaacggtaaaggtgaagtaagtaacagacttggagaagctggaagggaacagact
tttccgtctaagaaggcaaaacttttcaaagatggtcaagaaagtgatgtgtctctactt
gtaagccactctgaagagagggaatatattcaagatttttctggaaaaaactgtaaaggt
gaagtaaataacagacttggagaagctggaagggaacagacttttccgtctaagaaggca
aaacttttcaaagatggtcaagaaagtcatgtgtctctacttgtaagccaatctgaagag
agggaatatattcaagaattttctggcaaaaacggtaaaggtgaagtaaataacagactt
ggagaagctggaagggaacagacttttccgtctaagaaggcaaaacttttcaaagatggt
caagaaaggcatgtgttttctgtgggagagcctccaagcaattgtgatcgcccttcgaag
tccggagaaggcaatgtctctggaaatgatacagcaagtagtcgtgaagatccagatgtg
gctgatactattgaggatctggtggagcaggcaagtaaatttcaagatcagaagtctcct
gggaggatttcagaaaagactcttttttcaactagtgaacaatacaatacgggaaatcac
tctgtcactgggctgtctagacactggataaacagggtacataagaatgacgacatgggc
agtcctccaggaaaagtaactacaggcacttacggaaactttagtgagacgcagacagaa
tcgcaggttgttagttacgaggaagatctttcaggaaggcagatgcttatagacagagtt
agaacacgaagcagcataacgtaa
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