Camelina sativa (false flax): 104751642
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Entry
104751642 CDS
T05044
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
csat
Camelina sativa (false flax)
Pathway
csat03030
DNA replication
csat03410
Base excision repair
csat03420
Nucleotide excision repair
csat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104751642
03410 Base excision repair
104751642
03420 Nucleotide excision repair
104751642
03430 Mismatch repair
104751642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csat03032
]
104751642
03036 Chromosome and associated proteins [BR:
csat03036
]
104751642
03400 DNA repair and recombination proteins [BR:
csat03400
]
104751642
DNA replication proteins [BR:
csat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104751642
DNA Replication Termination Factors
ELG1-RFC complex
104751642
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104751642
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104751642
Check point factors
HRAD17(Rad24)-RFC complex
104751642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_assoc_2
AAA_22
AAA_11
AAA_16
AAA_14
ATPase_2
AAA_5
DNAX_ATPase_lid
DUF815
RuvB_N
AAA_24
ResIII
AAA_30
AAA_7
AAA_19
AAA_3
bpMoxR
nSTAND3
MCM
AAA_28
AAA_18
ABC_tran
Mg_chelatase
RLIG1
Motif
Other DBs
NCBI-GeneID:
104751642
NCBI-ProteinID:
XP_010471940
LinkDB
All DBs
Position
16:complement(21345269..21347934)
Genome browser
AA seq
383 aa
AA seq
DB search
MTEIASVMDIDVDENQPRKPVNKGKDVAGFGGGPPQGKATPWVEKYRPQSLDDVAAHRDI
IDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYRSMILELNASDDRGIDVV
RQQIQDFASTQSFSLGKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNHVN
KIIPALQSRCTRFRFAPLDPLHLSQRLKHVVDAEGLDVSEDGLAALVRLSNGDMRKALNI
LQSTHMASKQTTEEKRKALDTLQSTDAKSEQITAEEVYLCTGNPLPKDIEHIAGWLLNKS
FAESYKNISEMKTRKGLAIVDIVREVTMFVFKIQMPSDVRVQLINDLADIEYRLSFGCND
KLQLGAIISTFTHARSAMVGAAK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgactgagatagcgtcggtgatggacattgacgtagacgaaaatcagcctcgcaagccg
gtgaacaaggggaaagacgtcgccggttttggtggtggtccgccgcagggtaaggcgacg
ccttgggttgagaagtaccgacctcagtcgctcgatgacgtcgctgcacatcgtgacatt
atcgatacgattgataggctgaccaatgagaacaaattgccccatcttctgttgtatggt
cctcccggtactggcaaaacatccaccattctagccgttgcccggaaactttatggaccc
aagtaccgtagtatgattcttgaactcaacgcatctgatgatagaggaattgatgttgta
aggcagcagattcaagatttcgctagcacgcagagcttttctttaggaaaatcttctgtg
aagctggttctgctagatgaagcagatgccatgacaaaagatgctcagtttgccctgcgt
agagtaattgagaaatacaccaagagtactaggtttgcgctcattggaaaccatgtcaat
aagatcattccagctttgcagtcgagatgtactcgatttagatttgcccctctcgatcct
cttcatctgagtcaacgtcttaaacatgtagtagacgctgaagggcttgatgtaagtgag
gatggtttggcagctcttgtacggctgagcaatggggacatgagaaaagcactgaatatt
ttgcagtcaactcatatggcgtcaaagcaaactacagaggaaaagagaaaagcactggac
actttgcagtcaactgatgcgaagtcagagcaaattactgcggaagaagtttacctctgc
accggaaacccattgcccaaggacattgagcatatagctggctggcttctaaataaatca
tttgctgagagctacaaaaacatatcagaaatgaagacgagaaaaggacttgccattgtt
gatatcgtcagagaggttaccatgtttgtttttaagatccagatgccttcagatgtcaga
gttcaactgataaacgatctggcagacattgagtacaggttgagttttgggtgcaatgac
aaactgcagcttggagctatcatttctactttcacacatgcccggtctgctatggttggt
gcagcaaaataa
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