Camelina sativa (false flax): 104751802
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Entry
104751802 CDS
T05044
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104751802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104751802
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104751802
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
104751802
NCBI-ProteinID:
XP_010472140
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Position
16:complement(22146649..22150226)
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AA seq
858 aa
AA seq
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MVGSGHFPFWKPRETPWNLRSRTKSITQEQLAKRPDPFSLPFLLDGLDEDGKYGWLSDDV
KRFCKLRQYSTNGSTSLEDAEARGVKKTAKSVQIPNIDSDDELPQESVTLLDKRQKKLKG
VVVVDHDDGRRFSPTDKFTKCSDSSRNALRNSSNDDVMSENRSGSDTSLQGYDEEDSSMN
SIDSSENQNPLYVDAEEEEELWRQMAFIQESIKETVEHSQINDLKQVEDCDHSFICKDDI
GEVCRVCGLIKKPIESMIEVVFNKPKRSRRTYMHEKENGETSSTFSISRQSSQTKVLGEK
MFIHPRHDQAMRPHQTEGFRFLCNNLAAEEPGGCILAHAPGSGKTFLLISFLQSFMAMDP
QARPLIVLPKGIIDSWKREFTSWAVENVPLFDFYSVKAESRKQQLKVLGQWVEQRSILFL
GYEQFAKIICDDKFEAASEKCKLILLEKPTLFILDEGHTSRNKETNMLISLARVRTPRKV
VLTGTLFQNNVEEVFNILNLVRPKFLKRPGTREIVNRIMSKAEIPSGKQMNQSSIEGTFF
AAVEFTLQKSTNSSAKASLIKDLREMTRNILHYHKADFRGLLPGLSEFTIMLNLSSIQRD
EVEGLRNMELFKQISLGAALYIHPKLKSFLEENPSNSEKSFDDNNNTMRKLDKVLEKINV
RDGVKMKFFLNLLALCESTGEKLLVFSQYIAPIKTLEILMSSMKGWHLDKEMFTITGDSS
NEQRESSMERFNNSPEAKVFFGSIRACGEGISLVGASRVLILDVHLNPSVTQQAVARAYR
PGQKRKVYAYRLVAADSPEEENYKTSTRKETMSKMWFEWNVGSVREDFGFRAIDVDHSGD
AFLETPKLKEDIKCLYTR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttctggtcactttccgttttggaagccgagggagacgccatggaatttgagg
tcgcgtacaaaaagcatcactcaagaacaacttgccaagcgtcctgacccattctctcta
ccatttctccttgatgggcttgatgaagatggtaaatacggttggctttctgatgatgta
aagagattttgtaagctgagacagtactctacgaatggttctacctcattggaagatgcc
gaagctagaggagtgaaaaaaacagccaagtctgttcagattcctaacattgattccgat
gatgagttgcctcaagaatcagttactcttctagataaaaggcaaaagaagctcaaggga
gtggttgttgtggatcatgatgatggacgtcggttctctcctacagataagttcacgaag
tgctcagattcttcacgcaatgctcttcgaaacagttctaatgatgatgttatgagtgag
aataggtcaggatctgacacaagtcttcaaggttatgacgaggaggattcatcgatgaat
tctattgatagtagtgaaaatcaaaatcctctatatgtagatgcagaggaagaagaagag
ctttggaggcagatggcatttattcaggaatcaattaaggaaacggtggagcattcacaa
attaatgatctcaaacaagtcgaagactgtgaccattccttcatctgcaaggacgatatt
ggagaagtgtgtcgtgtttgtggactcatcaagaaaccaattgagagcatgatcgaggtt
gtgttcaacaagccaaagagatcaagacgaacttatatgcatgaaaaagaaaatggggaa
acaagcagtaccttctcaataagccggcagtcttctcagacaaaagttttgggagaaaag
atgttcatccacccaagacatgatcaggccatgagacctcaccagactgaaggcttcaga
tttttatgcaacaaccttgcagcggaagagccaggcggatgcatattagctcatgcaccg
ggatcaggcaagacatttctgctcatcagctttctacagagcttcatggctatggatccg
caggctagaccattgatcgtcctaccaaaggggatcatagattcatggaagagagagttt
acttcgtgggcagttgagaacgtccccctttttgatttctacagcgtgaaagcagaatca
cggaaacaacagttgaaggttttggggcaatgggtcgaacagagaagcattctgtttctt
gggtacgaacagtttgcaaagatcatctgcgatgataaatttgaagcagcgtcagaaaaa
tgtaagctgatattgcttgagaaaccaactttgtttatacttgatgaaggtcatacatca
aggaataaggagacaaacatgcttatttcgcttgctcgtgtcaggactcctcgaaaggtg
gttctcacaggtactttgttccaaaacaatgttgaggaagtgtttaacattctgaatctt
gttcgtcccaagttcttgaagcgtcctggaactcgggagattgttaaccgtatcatgagc
aaggcagagataccgagtggcaaacagatgaaccagagtagtattgagggaactttcttc
gctgcagtagagtttacattacagaagagtacaaactcttctgccaaagccagcttgata
aaggatctacgcgaaatgacccgtaacatcttgcattatcacaaagcagatttcagaggc
ttgctccccggacttagtgagttcactatcatgctcaacctgagctcaattcagagagat
gaagtcgagggtctgaggaacatggaactgttcaagcagatctctcttggtgctgctttg
tatatccacccaaagctcaaatctttcttggaggaaaacccgtcaaacagtgaaaagagt
tttgatgataacaataacacaatgaggaagctagacaaggtgctggagaagatcaatgtg
agagacggtgtgaagatgaagttctttctaaacctcttagctctgtgtgaatcaacagga
gagaagctcttggtgttcagccaatacatagctccaataaagactcttgagatactcatg
agctcaatgaaaggatggcatttagataaagagatgttcacaatcacaggagattcgagc
aatgagcaaagagaaagttcaatggagcgattcaacaattctccagaggcaaaagtgttt
ttcggatcgataagagcttgtggggaaggaatatcactggtgggagcatcaagggttctg
atacttgatgttcatctgaacccatcagtgactcagcaagccgtggctcgagcttacagg
ccaggacagaagaggaaagtgtatgcatacaggctcgtagctgcggattcaccagaggaa
gagaactacaaaacaagtacgcgcaaggagacgatgtcgaagatgtggttcgagtggaat
gttggatcggtaagagaagattttgggtttagagccattgatgttgatcactccggtgat
gcgtttcttgagacgcccaagttaaaggaagacatcaaatgtttatacacaaggtaa
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