Camelina sativa (false flax): 104751900
Help
Entry
104751900 CDS
T05044
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104751900
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104751900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
Motif
Other DBs
NCBI-GeneID:
104751900
NCBI-ProteinID:
XP_010472252
LinkDB
All DBs
Position
16:complement(22715629..22721397)
Genome browser
AA seq
677 aa
AA seq
DB search
MKVGAPANKPGRIIVQVLLLVVVLLQSVHSQNSRNKLNITKPGQNIPAALTVQLRRVSHD
KVVIDNGIIQVTFSSPQGLITGIKYHGIDNVLDDEIEDRGYWDVTWYEPRKKLEIDKLEG
TKFEIITQNEEQVEISFTRTWTISKRGSLVPLNVDKRYIIRSGVSGIYMYGILERLEGWP
DVDMDQIRIVFKLNSKKFDFMAISDDRQRSMPSMADRDNAKQLAYKEAVLFTNPRNPMFK
GEVDDKYMYSMEDKDNNVNGWISSEPPVGFWMITPSDEFRLGGPMKQDLTSHVGPITLSM
FTSTHYAGKEMRMDYRNGEPWKKVFGPVFAYLNSVSPKDSTLRLWRDAKRQMAAEVKSWP
YDFVTSVDYPLRHQRGTIEGQFLIKDSYVSRLRIYGRFAFVGLAPIGEAGSWQTESKGYQ
FWTKADRKGRFIIENVRAGNYSLYAWGFGFIGDYKFEQNITITAGSEMNVGPIVYEPPRN
GPTLWEIGVPDRTAREFYIPDPYPTLMNKLYVNPLQDRFRQYGLWDRYADLYPQNDLVYT
VGVSDYRRDWFFAHVTRNVGNKTYQPTTWQIIFNLRNVNRVGLYTLRIALASAANSELQI
RINDPKSDHIFTTGYIGKDNAIARHGIHGLYRLYSIDVAGSLLNVGDNTIYLTQSRSLGL
FDGIMYDYIRLESPFRT
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcggagctccggcgaataagccgggtcggatcattgtccaagttcttcttctt
gttgttgttcttcttcaaagtgttcattctcagaactcacgaaacaaacttaacatcaca
aagcctggacaaaacatacctgcagccttaacagttcagctaagaagagttagccatgac
aaggtggtaattgataatggtattattcaagttactttctcgagcccacaaggcttaata
actgggataaaataccatggtatcgataatgtgctggacgacgagattgaggatcggggg
tattgggacgttacctggtatgaaccgagaaagaaattggaaattgacaaattagaagga
actaaatttgaaatcataactcagaatgaagaacaagttgaaatatcatttacaagaacg
tggactatctccaaacgtggctccttggttcccctaaacgtagataaaagatatatcatt
cgaagtggtgtctccggaatatacatgtacggtatcttggagaggttagaaggttggccc
gacgtggacatggaccaaatcaggatcgtcttcaagctcaactcaaaaaaatttgatttc
atggcgatatcagatgatcgacaaagaagcatgccatcaatggcggatcgagacaatgct
aagcaattagcttacaaagaagctgttctttttacaaatccaaggaaccctatgttcaaa
ggagaggtagatgataagtatatgtactcaatggaagacaaagacaacaatgtgaatggt
tggatctcatcggaaccaccggttgggttttggatgataactccgagcgatgagttccgt
cttggtggtcccatgaagcaagacctcacctctcatgtcggacccatcaccctctccatg
tttacaagcacccattacgcggggaaagagatgagaatggattatagaaatggagagcca
tggaagaaagtgtttggtcctgtcttcgcttatctcaactctgtttctcccaaagattcc
actcttcgtctatggagagatgctaaacgacagatggctgcagaggtcaaaagctggcct
tatgattttgttacttcagtagattatcctctgcgtcatcaaagaggtactatcgaagga
caatttcttatcaaagatagttacgtgtcaagattaaggatatatgggagatttgctttt
gttggtctggcaccaattggtgaagccggttcatggcaaaccgaatccaaggggtatcaa
ttttggacgaaagctgacagaaaagggagatttataatagagaatgtgagggcaggcaat
tatagtctctacgcatggggttttggttttattggagactataaatttgagcaaaacatt
accattacggcaggtagcgagatgaatgtaggtcctatagtgtatgaaccgccaagaaac
ggtccgacgttgtgggaaatcggtgtacctgaccgaaccgccagagaattctatataccg
gatccataccctacactgatgaataagctttatgtcaacccactccaagacagatttagg
caatatggattatgggatcgttacgcagatttataccctcaaaacgatcttgtgtacaca
gtgggtgtgagtgattatagaagagattggttctttgcacatgttaccagaaacgttgga
aacaagacataccaaccaacgacatggcaaatcatatttaaccttagaaacgtgaaccga
gtcggactctacacgctcagaatagctctagcctcagccgcaaattccgaactacaaatc
cggatcaacgatcccaaatccgatcatattttcacgacgggttatatcggaaaagacaat
gcaatcgcgagacatggaattcatggtttatatagattgtatagtatagacgtcgccgga
agtttactaaatgttggtgataatacgatatatttaacacaatcgagaagtttaggacta
tttgatggtattatgtatgattatattcgtcttgaaagtccttttagaacttga
DBGET
integrated database retrieval system
