Camelina sativa (false flax): 104752026
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Entry
104752026 CDS
T05044
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 6
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csat
Camelina sativa (false flax)
Pathway
csat04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
104752026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csat04040
]
104752026
Ion channels [BR:
csat04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104752026
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
104752026
NCBI-ProteinID:
XP_010472393
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Position
16:complement(23465367..23468831)
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AA seq
748 aa
AA seq
DB search
MFDTCGSKRVKSQVISGQLEKFVRLDSMDSRYSQGSEAGLNKCTLNIQGPKRFAQGSKTS
SGSFKKGFRKGSEGLWSIGRSIGLGVSRAVFPEDLEVSEKKIFDPQDKFLLLCNKLFVAS
CILAVSVDPLFLYLPFINDKAKCVGIDRKLAIIATTIRTVIDSFYLFHMALRFRTAYVAP
SSRVFGRGELVIDPAQIAKRYLQQYFIIDLLSVLPVPQIVVWRFLFNSMGENVLATKQAL
RYIVLVQYIPRFLRMYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGALWYLLAL
ERNNDCWSKACHFNNQTCARNFLFCGNQNMKGYAAWDKIKVSVLQQYCPVDVPEDEEPPF
DFGIYLRALSSGIVSSKNFVSKYFFCLWWGLQNLSTLGQGLETSTYPGEVIFSITLAIAG
LLLFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLET
RGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTEKSY
LVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGDELLTWALDPKSGANL
PSSTRTVKALTEVEAFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAA
WRRYTKRKKLEQLRKEEEEEEESAAASVIAGGSPYSIRATFLASKFAANALRSVHKNRTA
KSALLLSSTKELVKFQKPPEPDFSAEDH
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatacttgtggttccaaaagagtcaaatctcaagtcatcagtggccaacttgag
aagtttgtcaggttagatagtatggactcgagatactcgcaaggttctgaagctggtcta
aacaaatgcacattgaacatacaaggacctaaacgttttgctcaaggaagcaaaacatca
tctggatcttttaagaaaggttttagaaaaggatcagaaggactttggtctataggtaga
tcgatcggactcggggtttcgcgtgcagtgtttccagaagatcttgaagtatctgagaag
aagatatttgatccacaagacaagtttcttttgctctgcaacaagttgtttgtagcttct
tgtatactcgcagtatccgtggatccgctcttcttgtatcttccttttatcaacgataag
gccaagtgcgttggcatagacaggaaactggcaattatagcaacaacgataaggacagtt
atagattcgttttatctctttcatatggctttacggtttagaacagcttatgttgctcca
tcgtcgcgtgtttttggtcgtggagagcttgttatagaccctgcacagatagctaaacgg
tatctgcaacagtacttcatcattgatttgctttctgtgcttcctgttccacagattgta
gtttggagatttctcttcaattcaatgggtgaaaatgtgctggcaaccaaacaagcactt
cgatatatcgtgttagttcaatatataccgcgttttcttcgaatgtatcctttaagttca
gagttgaagagaacagcaggtgtatttgctgaaactgcttgggctggtgcagcttattac
ttactactctacatgctcgcaagtcatattgttggggctttgtggtatttgcttgcttta
gaacgcaataacgactgctggagtaaggcctgccactttaataaccagacatgtgccaga
aacttcttgttttgtggtaaccaaaatatgaaaggttatgctgcttgggacaagattaaa
gtttcggttcttcagcaatattgtcctgttgatgtccctgaggatgaagaacctcctttt
gattttggaatctacttaagagcactctcctctggcatcgtctcatctaagaactttgtc
tctaagtacttcttctgtttgtggtgggggcttcagaatcttagtacacttggtcaaggg
cttgaaacgagcacataccctggagaggttatattctcgataacacttgctattgctgga
ctgctactctttgctcttctcattggaaacatgcagacttatcttcaatcgctaactatc
cggttagaagaaatgcgagtcaaaagacgtgactcagaacagtggatgcatcatcgaatg
cttccaccagaactgcgagaacgtgtcagacgatatgatcagtacaagtggttggagact
cgtggagttgatgaagagaatcttgttcagaacctcccaaaggatcttagaagagatatc
aaacgtcatctctgtctcgccttagtcagaagagttccattgtttgagaatatggatgag
aggctgctagatgcaatctgtgagaggcttaagccatgtttattcactgagaagtcttac
ttggttcgtgaaggagatccagttaacgagatgctcttcataatccgtggtaggctcgag
agtgtaaccactgatggtgggagaagcggattctttaaccgcagtttacttaaagaagga
gatttctgcggtgacgagcttttgacatgggcacttgatcccaaatcaggtgctaacctc
ccatcctcaacaagaaccgtgaaggctttaaccgaagtagaagctttcgctttgatagcg
gatgagctgaaattcgtggcgagtcagttcaggagactccatagcagacaagtgcaacac
acattcagattctattcacagcaatggaggacttgggccgcttgcttcatccaagctgca
tggcgacggtacacaaagaggaagaaactggagcaacttagaaaagaagaggaagaagaa
gaagagtcagcagcagcatcggttatagcaggaggaagtccgtatagcataagagctacg
ttcttggcttcaaagtttgcggctaatgcacttcgtagcgttcacaagaaccggactgcg
aaatctgctttgttgttgtcatctactaaagaattggtgaagtttcagaaacctccagaa
ccagacttctcagctgaagatcattga
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