Camelina sativa (false flax): 104752362
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Entry
104752362 CDS
T05044
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104752362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104752362
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104752362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
104752362
NCBI-ProteinID:
XP_010472779
LinkDB
All DBs
Position
16:complement(25148780..25162862)
Genome browser
AA seq
2093 aa
AA seq
DB search
MPLFMPDEELARLSSDAASVVAERADEYIRKIYADLDSVRAKADAASITAEQTCSLLEQK
YLSLSQDFSSLESQNAKLQSDLDDRLAELAQSQAQKHQLHLQSIEKDGEVERITTEMSEL
HKSKRQLMDLLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEANAELARSQAMC
SRLSQEKELTERHAKWLDEELTAKVDSYAELRRRHSDLEADMSGKLVDAEKNYNECSSSL
NWHKERLRELETKISSLQEDLSSCKDVATTTEEQYNAELHTANKLVELYKESSEEWSRKA
GELEGVIKALEERLSQVENSYKDRLEKEVSTKQLLEKENEDLKQKLEKCETEIEKSRKVD
ELNLIPFSSFTRRGDDCGTSNMIEESQAVISKVPAGVSGTALAASLLRDGWSLAKIYEKY
QEAVDALRHEQLGRKEAEMILQRVLSELEEKAGFIQEERGEYERMVEAYSLVNQKLQDSV
SEQSKMEKFILELKADLRRRERENKLFQKDISDLQKQVTILLKECRDVQLRCGAARDDDD
DEDYPLLSDVEMDRESEADKIISEHLLKFRDINGLVEQNVKLRSLARSLSEEIESREMEL
KEKFEIDLKDRTYEASAKVATILKRAEEQGQMIESLHTSVAMYKRLYEEEQKLHSSDSRS
SELSPAVVPGRKNFLHLLEDSEEATKRAQEKAFERIRSLEEEFAKARSEIIAVRSERDKV
AMEANFAKEKLEGIMKESERKREEMNSVLARNIEFTQLIIDHQRKLRESSESLHAAEEIS
RKLSMEVSVLKQEKEVLSNAEKRASDEVSALSQRVYRLQATLDTVQSTEEVREEARAAER
RKQEEHIKQLEREWAEAKKELQEERSSARNITSDSNQTLKKAVMQVEEMGKELANSLKAV
SVAESRASVAEARLSDLEKKIRASDPKVLDMDNGGIISLSDNEMSVELRIAKDEIEKLSG
DVESSKSHMLQYKSIAQVNETALKQMESAHENFRLEAEKRQRSLEAELVALRERVSELEN
DCIQKSEQLATAAAGKEDALVSASAEIASLREESLVKNSQMEALNIQMSTLKNDLEMEHE
KWRVAQRNYERQVILQSETIQELTKTSQALAALQEEASELRKLADARGIEISELNAKWSE
QKLMLEQQKNLAEKKYHELNEQNKLLHSRLEAKHLNSAEKDSRSGKISSGSTNTDQPEDS
GLQSVVNYLRRTKEIAETEISLMRQEKLRLQSQLESALKMAESARESLNAERASTRASLL
TEDGIKSLQLQVSEMSLLRESNMQLREENKHNFEECQRLREVAQKARMESEDFENLLKKK
QTELELCMKEMERLRMETDLQKKRVDELRETYRNIDVADYNRLKDEVRQLEEKMKVKDAH
VEDFKKLLLEKQNKISLLEKELTNCKKDLSEREKRLDDVQQAQATLQSEFNKQKQELEKF
KRAYSSLNTTKRKYEKEKEDLNKVNQSLSKQLDEAKEAGKRTTTDAMVEQAVKEREEKEH
RIQFMDKYVHTLKEEVKKKTEDLKKKDEELTKERTERKSVEKEVGDSLTKIKKEKTKVDE
EFAKLERYQTALAHLSEELEKLKQADGNLPEGTAAVQVLSGSILNDKAAAYVSAVEYFER
VARSIAINSQVSTKPTDMVTEPSSGTSAAVESSAIARAPSSTPLKAPVATTQQPPKVATD
NKEKRSTLQKPSTEVRRPGSSRRIIRPQLVKPEESPQVDVDMPEAEGAGDDGKQSAAHET
ESQVTTSVRPVRKRQAESLVPEPQLESLIRGETSPEIAPPASKKTKVSESQPDASEGQNL
AKEPAIEESMDATTAADGDNEETEAENAEEESLEALQENEAEVQDKADEPVEENPTEIET
ILTEEESRDQTEQENQELLTDMESDKEEGELDLDTLEDVDEATDIANMMRSPEKEEVQPE
TLATPTQSPTRMETAIEEAETTTETPLEDDKTDEGGDAADEASDKPNYANDQQEVPETDL
KPETTAATTSPASTAPPTSSTQASAITLSGAPDTEETKRAASPGGESSTMVTLAERAILK
RKERIASLGGTARAPNPAIRGRGRTVNLRGGGRLLTRGGRAPRGGRGQSPSPQ
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgtttatgccagacgaagagctggcgcggctatctagcgacgccgcgtcggtg
gttgcggagagagccgacgagtacatacgcaagatatacgccgatttggatagtgtacgt
gctaaggctgatgctgcttccatcacggcggagcagacctgttcgcttctcgagcagaag
tacctctcgctatctcaggatttctcttccctcgaatctcagaacgccaagcttcagtct
gatttagacgatcgtttagctgagcttgctcagtctcaagcgcagaagcaccagcttcat
ttgcaatcgattgagaaggatggagaggtggagaggataacgacggagatgtcagagctt
cataagtctaagaggcaactgatggatttactggagcagaaagatgccgagattagtgag
aagaattccaccatcaagagctacttagataaaattgttaagctgacggacactagttca
gagaaggaggcccgactagctgaagccaacgcagaattggcacgttctcaggctatgtgc
agtcgtctatctcaggagaaagaactcacggaaaggcatgccaaatggctagatgaggag
ttgacagccaaagtcgacagttacgctgaactccgtagaaggcattcggatcttgaagct
gacatgtcaggaaagcttgtagatgctgaaaaaaattataatgagtgttctagttcatta
aattggcataaggaaagattgagagagctggaaaccaaaattagctcattacaagaggac
ctcagctcttgtaaagacgtagcaacgaccactgaagagcaatacaatgctgaacttcac
actgcgaacaagcttgttgagctgtacaaggaaagttcggaggaatggtctagaaaggct
ggcgaacttgagggtgttattaaggctttagaggaacgcttgagccaagtcgagaatagt
tacaaagatagacttgagaaagaggtgtctacaaaacagctgttagagaaggagaacgaa
gaccttaaacaaaaacttgagaagtgtgaaacagaaattgagaaaagtaggaaagtagat
gagctgaatctgatacctttcagcagtttcacaagacgcggtgacgattgtgggaccagc
aacatgatagaggaaagccaggcagtaatttcgaaggttcctgctggtgtgtcaggaact
gcactagcagcttcactcttacgtgatggatggagtcttgccaaaatttatgagaagtat
caagaggctgttgatgccttgaggcatgagcaattaggtcgaaaggaagctgagatgata
cttcaacgggtgttatctgaattagaagagaaagccggatttatccaagaagaaagaggg
gagtatgagaggatggttgaagcgtatagtctagttaatcaaaaacttcaggattctgtc
tctgaacaatcaaagatggagaagttcattttggagctaaaggctgacttgaggagacgg
gaacgtgaaaacaaactattccagaaagatatatctgaccttcagaaacaggttacaata
ctacttaaggagtgtcgtgacgttcaacttcgatgtggagctgccagggatgatgatgat
gacgaagattatcctctgctatctgatgttgagatggatagggaatctgaagctgacaaa
atcatttcagagcatcttttaaagttcagagatataaatggattagttgagcagaatgtt
aagctgagaagtcttgctcgtagtctttcagaggagattgaaagtagggaaatggagctg
aaggaaaagtttgagatagacctgaaggataggacttatgaagcttctgccaaggtagcc
accatactaaaacgagctgaagagcagggacagatgattgaatcacttcacacatctgtt
gcaatgtataagcgattatatgaagaggagcagaaacttcattcatctgattctcgttct
tcagagttgtctccagctgtagtgccaggaaggaagaacttcttacatctgcttgaggat
tcagaggaagctactaaaagagcccaagaaaaagcttttgaacgcatccggagtctcgag
gaagagtttgcaaaggctaggagtgagataattgcagtaaggtctgaacgagataaggtg
gcgatggaggcaaattttgctaaggaaaaactagaaggaatcatgaaagaatctgaacgc
aagagagaagaaatgaacagcgttttggcaagaaacatagagttcacacagttaatcatt
gaccaccagcggaaattgcgcgagagttccgagtctctgcacgcagcggaagagatttcc
agaaaattgtctatggaggtctcggttctcaaacaagaaaaagaggtgttatcaaatgct
gaaaaaagagcttctgatgaagtttctgctctatctcagagagtttaccgtcttcaggct
accttggatactgtacaaagtacagaggaagttcgtgaggaagcaagagctgccgagaga
aggaaacaagaggagcatatcaagcaacttgagagagaatgggctgaagctaagaaagaa
ttgcaagaagaaaggagtagtgcgcggaacattacttcggacagcaatcaaactttgaaa
aaagctgtaatgcaggtagaagaaatgggaaaagaattggctaattccttaaaggcggtc
tcagtagcagagtccagggcttctgtggctgaggctagactttctgatttggagaagaag
ataagagcgtcagatcctaaggttcttgatatggacaatggtgggattatttctctttcg
gataatgagatgtctgtagaattgcgtatcgcgaaggacgaaattgaaaaattaagtgga
gacgtagaatctagcaaaagccacatgctccagtacaagagtatagctcaggtgaatgaa
actgcgttaaagcagatggaatctgcccatgagaacttcagacttgaggctgaaaagaga
caaagatcgttggaagcagagcttgttgctcttagagagagggtgtcagaacttgaaaat
gactgtatacagaagtccgagcaactagccactgctgctgcaggaaaagaagatgctctt
gtatcagcatcggctgaaattgcaagtctgagagaagaaagcttagttaaaaattcccaa
atggaagcattgaatatccaaatgtccactttgaagaatgaccttgagatggaacatgag
aaatggcgtgttgctcagagaaattacgaaagacaggttattctgcagtctgaaactatt
caggagcttacaaaaacatcacaagctttagcagcccttcaagaggaggcatctgaacta
cgtaaactagctgatgcacggggaattgaaatttctgagcttaatgccaagtggagtgaa
cagaaattgatgctagagcagcaaaagaatctggctgagaaaaagtatcatgaactcaat
gaacagaacaaattacttcatagtagacttgaggctaagcatctcaactccgctgagaag
gacagtcgttctggaaaaatatcatctgggagcactaacacagatcaacctgaagattcg
ggtttgcaaagtgtagttaactatctacgcagaaccaaagaaatagctgaaactgagatc
tcactaatgagacaggagaaactacggttgcaatcgcaacttgagagtgccttgaagatg
gcagaatctgcccgggaatcacttaatgctgagcgcgccagtacaagagcctcattgttg
actgaggatggaatcaaatctcttcagcttcaggttagtgagatgagcttgctccgtgaa
agcaacatgcaactcagggaggaaaacaaacacaattttgaggagtgtcagagattgcgt
gaggtagctcaaaaggctaggatggaatcagaagattttgaaaacctcttaaagaaaaag
caaacagagttggagttgtgtatgaaagagatggaaaggctaagaatggagacagatctt
caaaaaaagagggttgatgagttgcgggagacatatagaaacatagatgttgctgactac
aatcgcctcaaagatgaagtgcggcaattagaggagaaaatgaaagtaaaagatgctcat
gttgaagatttcaaaaaacttctgttagagaagcagaacaagatatctctattggagaag
gagctaacaaattgcaaaaaagatctgagtgagagagagaagaggttagatgacgttcag
caagcacaggctactttgcagtcagagttcaacaagcagaaacaagagttagaaaagttc
aagagagcttattcttctttaaatacgaccaagagaaaatacgaaaaagagaaggaggat
ttgaacaaagtaaaccagtcactctctaaacagttggacgaagccaaagaagctggaaag
agaacaacaactgatgctatggtggagcaggccgttaaggagagagaggaaaaagagcat
agaattcagtttatggataagtatgttcatacactgaaagaggaggtgaagaaaaaaact
gaagatttgaagaaaaaggatgaggagttaactaaagagagaacagaacgcaagtctgtt
gagaaggaagttggggattccttgaccaaaattaaaaaggagaaaaccaaagtggacgaa
gagtttgctaagctcgagaggtatcaaacagcattggcccatctctctgaagaattggaa
aaattgaagcaagcggatggcaatcttcctgagggtactgcagctgtccaggttctatct
ggaagcatattgaatgacaaagctgccgcttacgtgtcagctgtagagtacttcgaacgt
gtggctcggtctattgccatcaattctcaagtcagcacaaagcctactgatatggtgact
gaaccttcctctggcacttctgctgctgttgagtcttcggccattgcgagagccccttct
tcgacacctttaaaagctccggtggcaacaacccagcagccacccaaagtagcgacagac
aacaaagaaaagagatcgactttgcagaaaccaagcactgaggtccgtagaccaggtagt
agtaggaggattattcgtcctcaacttgtcaaacccgaggaatctccccaagttgatgtt
gatatgccagaagctgaaggagctggtgatgatggaaaacagtctgcagcccatgaaaca
gaaagccaagtgaccacatctgtacgacctgtccgtaaacgccaggctgagtcgttggtt
cctgagccacaactagagagtctgattcgaggggaaaccagtcctgagattgcaccacct
gcgtcgaagaagacaaaagtatctgagtcacaacctgatgcttccgaaggtcaaaacctt
gcaaaagagccagccatagaagaatcgatggatgctactactgccgctgatggtgacaat
gaagaaacagaagccgagaatgcagaggaggaatcactggaagcactacaagaaaatgaa
gctgaagtgcaggataaagctgatgaaccagtggaagaaaatccaactgagatagaaacc
atccttactgaagaagagtctagggatcagaccgaacaagagaaccaagagcttcttaca
gatatggaatccgataaggaggaaggagagctcgatctagacacacttgaagatgtggat
gaggctacagatatagcaaacatgatgaggagtccagagaaagaagaagtgcaacctgag
acgctagctacccccacacagtcacctaccaggatggagactgcaatagaagaagctgaa
acaaccactgagacaccgcttgaagatgataagaccgatgaaggaggtgatgcagctgac
gaagcctctgataaacctaactatgctaatgatcaacaagaagtgccagagactgatctc
aaaccagagaccacagcagctacaacctcccctgcatctaccgctccacccacttcctct
actcaagcttctgctattactttaagcggagctccagacacagaagaaaccaaaagagct
gcgtcaccaggtggtgaaagttcaactatggtgacactagctgaaagagcaatactgaaa
agaaaagaaagaatagccagtcttggaggaaccgctagagctcctaatccagccatcaga
ggtcgcggtcgaactgtaaaccttcgaggaggtggacgattgctgactcgtggtggtcga
gccccacgtggtggacgtggacaatccccgagcccgcaatga
DBGET
integrated database retrieval system