Camelina sativa (false flax): 104752370
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Entry
104752370 CDS
T05044
Name
(RefSeq) protein strawberry notch
KO
K26273
protein strawberry notch
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104752370
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104752370
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
Zn_ribbon_FGT1_1
Zn_ribbon_FGT1_2
PHD
ResIII
DUF349
PHDvar_NSD
Zot
HECT_2
PHD_4
Helicase_C
Motif
Other DBs
NCBI-GeneID:
104752370
NCBI-ProteinID:
XP_010472790
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All DBs
Position
16:complement(25178289..25187207)
Genome browser
AA seq
1301 aa
AA seq
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MTQSPVQPPPPLSAPPHSAAAGGVLRGDVQVRCAGCRVILRVKTGVVEFSCPTCQLPQML
PPELLSRARPQFPQSQQPPPPPQPQPIQTLPPQIQQQLKPPLNLPRPPVPAHGIDPTKMQ
LPCANCQAILNVPHGLTRFSCPQCHVELAVDVSKLNRSLTAPHSHPNPPTPAAPPVPPPP
PPEEVNEEAIEVEREEDEGGTAGETFMDYRPPKLSIGPPHPDPIVETSSLSAVQPPEPTY
DLKIKEELERSKALSCLQIETLVYACQRHLQHLADGTRAGFFVGDGAGVGKGRTIAGLIW
ENWKHGRRKALWISIGSDLKYDARRDLDDVGATSVGVNPLNKLPYSKLDSKNVGVKEGVV
FLTYNSLIASSEKGRSRLQQLVQWCGPEFDGLLIFDECHKAKNLVPEAGSQPTRIGQAVV
DIQDKIPQARVLYCSATGASEPRNMGYMVRLGLWGAGTSFSDFNKFLGALDKGGTGALEL
VAMDMKARGMYVCRTLSYKGAEFEIVEARLEEGMEAMYNKSAEFWAELRIELLSASAFLP
NEKPNSSQLWRLYWSSHQRFFRHLCMSAKVPVTVRLAKKALSANKCVVIGLQSTGEARTE
EAVTKYGLELDDFVSGPRELLLKFVEENYPLPEQPEPLSEDDSVKELQRKRHSASPGVSI
RGRVRKMAKWKPDSDDESDLESEADSADDSNDSDDEFQICQICSGEDERKKLLHCSECDK
LFHPDCVVPPVTDLPSEAWICYSCKEKTEEYIQARRLYIAELQKRYEAALERKLKIIEII
RALNLPNNPLDDIVDQLGGPDKVAEITGRRGMLVRASNGKGVTYQARNTKDITMEMVNMN
EKQLFMDGKKFVAIISEAGSAGVSLQADRRAINQKRRVHLTLELPWSADRAIQQFGRTHR
SNQTSAPEYRLLFTNLGGERRFASIVAKRLETLGALTQGDRRAGPSGPSLSAYNYDSNFG
KKSLMVMYRGIMEQEKLPVVPPGCSVDEPETIKEFLTKARAALVAVGIVRDSVLANGKDV
GKFSGRIIDSDMHDVGRFLNRLLGLPPDIQNRLFELFTSILDVLVHNARIEGSFDSGIVD
MKANSVELLSTPKTVHVDQMSGASTMLFTFTLDRGVTWESASSMLEGKRRDGLGSANDGF
YESKREWLGKRHFILAFESAASGLFKIVRPAVGESIREMSLSELKTKYRKLSSLEKARTG
WEDEYEVSSKQCMHGPKCKLGEYCTVGRRVQEVNVVGGLILPIWGTIEKALSKQSRHSHK
RVRVIRIETTTDNQRIVGLSIPNAAVETVLQDLAWVQEIDD
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagtcgcctgttcaaccgcctccgccgctttccgctccgccgcattccgccgcc
gccggtggtgtattaagaggcgatgttcaggttcggtgcgctggctgtcgcgtgattctt
agggtgaagaccggcgttgttgagttctcttgtcccacttgtcaacttccccaaatgttg
ccgccggagcttctttctagggcacggccgcagtttccgcagtctcaacaaccacctcca
ccgcctcaaccgcagccgattcagacgcttccgcctcagattcaacagcagcttaagcct
cctctcaatttacctaggcctcccgttcctgcacatggaatcgatccgaccaagatgcaa
ttgccttgcgctaactgtcaggctatcctcaatgtgccacatggactcactcgcttctct
tgtccgcagtgccatgtcgagctcgctgttgatgtctccaagcttaatcgttctttaact
gctcctcattctcatcctaaccctcctactcctgctgccccgcccgttcctcctccgcct
cctcccgaagaagtcaatgaggaagctattgaagtggagagagaagaagatgaaggtgga
acggcaggagaaacgtttatggattatcgtcccccaaaactttcaatcggacctcctcat
cctgatccaattgtggagacatcatctctatctgcagtgcaacccccagagcccacttac
gatctcaaaatcaaggaagagctcgaaaggtcaaaggctttatcgtgcttgcagattgag
acattagtttacgcttgtcagaggcatctccagcaccttgctgatggtaccagagcaggc
ttttttgttggagatggtgctggtgtggggaaagggcgaacaattgccgggttgatttgg
gaaaattggaaacatggaaggaggaaagctttgtggatttctattggctcagacttgaag
tatgatgcaagaagggacttggatgatgtgggtgccacatccgttggagtgaatcctttg
aacaagctaccttattcgaagcttgactcaaaaaatgttggtgttaaagaaggagtggta
ttcttgacatacaatagcctcattgcttcctctgagaagggccgttctcgtttacagcag
cttgttcaatggtgtggaccagaatttgatggtctcttgatctttgatgagtgccataaa
gcgaaaaatttggtacctgaagctgggagtcagccgacacgcatcgggcaggcagttgtt
gacattcaggataagatcccccaagcacgtgttctttattgctctgctactggtgcatca
gaaccacgaaacatgggttatatggtcaggcttggtctttggggagctggaacaagtttc
agtgatttcaacaaatttttaggtgcccttgataaaggtgggacaggagcgttggaattg
gttgcaatggacatgaaagcgagggggatgtatgtatgccgaaccctgagctacaaaggg
gctgagtttgagattgttgaagctcgtttagaagaaggaatggaggcaatgtacaataag
tctgcagaattttgggcggagctacggatagagttattgtcagcaagtgcttttctccct
aacgagaaaccaaattctagtcagttgtggagattatactggtcaagccaccagcgtttc
tttagacacttatgtatgtcagctaaagtccctgtaactgtgagattagcgaagaaagcc
ttgtcggcaaataagtgtgttgttattggccttcagagtaccggagaggctcgaaccgaa
gaggctgtaactaaatatggtcttgagcttgatgattttgtctcgggacctcgagagctc
ttgttgaaatttgtggaagagaattatccattgccggagcagcctgaacctctgtcagag
gatgatagtgttaaagaacttcagagaaagagacattcagcttcacctggtgtttcaatt
agaggaagagtaagaaagatggcaaagtggaaaccagatagtgatgatgaaagtgatttg
gagtctgaagctgactctgctgacgattctaatgattctgatgatgagttccagatatgt
cagatatgcagtggggaagatgaaaggaagaagttgctccattgttctgaatgtgacaag
ctttttcatccggactgtgtggttcctccagttacagacttgccatctgaagcgtggata
tgctattcttgcaaggaaaagacagaggagtacattcaagcaagacgtctctacattgcg
gaattgcagaaaaggtatgaagcagcgttggaacgaaaattaaagatcatagagattatc
cgtgccctgaatcttccaaacaatcctttagatgacattgtcgatcagcttggaggccct
gacaaagttgcagaaataacaggcaggcgaggtatgcttgtaagagcatctaatgggaaa
ggcgttacgtatcaagcaagaaacacaaaggatatcacaatggaaatggtcaacatgaac
gagaaacaactatttatggatggtaaaaagtttgttgccattatttctgaagctggttca
gctggtgtttcgttacaagcagatagaagggcaataaatcagaaaagaagggttcacttg
actttagagcttccctggagtgctgatcgtgcaattcaacaatttggaagaactcaccgg
tcgaatcagacatcggctcctgaatataggttactcttcacaaatctcggtggggaacgc
cgctttgcctctatagttgcaaagagactagaaactcttggtgctttaacacagggagac
cgcagggctggaccctccgggccttctttgagtgcctacaattatgatagcaactttggt
aaaaagtccttgatggtgatgtatagaggaataatggagcaggagaaactacctgttgtt
cctcctggatgctcggttgatgaacccgaaacaattaaagagtttttgaccaaagcaagg
gctgcccttgttgcggttggaattgttagggacagtgttctagccaatgggaaagatgtt
ggaaagttttcaggacgcattattgattctgacatgcatgatgttggacgatttctgaat
cgcctcttgggattgccacctgatatccagaataggttgtttgaattgtttactagtata
ttagacgttcttgtacataatgctcggatcgaaggaagttttgattcaggaattgtggat
atgaaagctaatagtgttgagctgctgagcactccaaagaccgtccatgttgatcaaatg
tctggtgcctcaactatgctctttacttttactctggatcgtggtgttacatgggagtct
gcaagttcaatgctagaggggaagagaagggacggacttggttctgctaatgatggcttt
tatgaatctaaaagggaatggttaggaaaacgacacttcatattagcatttgagagtgcg
gcttccgggttgtttaagattgttcgtcctgctgtaggagagtcaatcagggagatgtct
ctttcagagttgaaaactaaataccgaaaactctcatctctggagaaggctcggactggt
tgggaagacgagtacgaagtttcttctaaacagtgtatgcatggacccaagtgtaagctg
ggcgagtattgcacagttgggcgaagagtacaggaagtaaacgttgtgggtggcctcatt
cttcccatctggggaaccatagagaaagctctctcgaaacaatcccgtcatagccacaag
agagttcgagttatacgcatagagactacgacggacaatcagcggatagttggcctctct
atacctaatgcagctgttgaaactgtattacaagatttagcatgggttcaagagattgat
gattaa
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