Camelina sativa (false flax): 104752451
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Entry
104752451 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104752451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104752451
03036 Chromosome and associated proteins [BR:
csat03036
]
104752451
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104752451
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104752451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
104752451
NCBI-ProteinID:
XP_010472890
LinkDB
All DBs
Position
16:complement(25578908..25583942)
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AA seq
1042 aa
AA seq
DB search
MTSVQPFRETSWMAGNLDSQKKRRISLGGVTALSEEITDSLPMLNSPDYFLKPCMLELVE
REIENPGYCSRVPDFTIGRIGYGYIKFLGNTDVTRLDLDQIVQFQRHEVIVYDDESSKPV
VGEGLNKAAEVTLVVNIPNLTTLGKVQVDHIAYKLKQSAERQGATFISFDPDNGLWKFLV
PHFSRFGLSDDEAEDIAMDDAPGLGDPVRLDGDKVADIVEEHQMETSEPELSHSLPAHLG
LDPRKMKEMRMLMFPSEDLNEADDFREQTSHHMASLTKQNVRPSQKISQRNSLQDTPPVL
RKTPLALLEYNPGNDKSSPGSILMVQQNKNLSVKKSKMGGFELDISHVTPLSDNYSRNVV
DAALFMGRSFRAGWGPNGVLFHTGKPICSSSSQMVLSSVVNKEKIAIDKVVWDRKENVQK
ELIDSAFEAPLSLHKALKHQEEEVTFGSFSLKLQRVVTDRVVLSDICRHYIGVIEKQLEV
AGLSRSAKLYTMHQVMVWELIKVLFSDRQSTETLNYAASDNEEDMMQDVKEDSAEVNTEA
LPVIRRAEFSYWLQESVSHRVQEDVSDLNGSGYLEHLFFLLTGRELDSAVELAISKGDVR
LACLLSQAGGSTVNRNDILQQLHLWRRNGLDFNYIEKERIKLYELLAGNIHDALQDFTID
WKRFLGLLMWHHLPPDSSLPVIFRNYQLLLDQAKAPWPVPIYIDEGPADGFVSNKKRSDL
LYYLMLLHSKDEEEIDFLKTMFSAFSSTDDPLDYHMIWHHRGILEAVGAFTSDDLHTLDM
GFVAQLLSQGLCHWAIYVVLHIPFREGQPYLHVIVIREILFQFCEIWSSMESQRQFIKDL
GIPSEWMHEALAVYYNYHGDFTKALDHFIECANWQRAHSIFMTSVAHSLFLSANHSEIWR
IATSMDDRKSEIENWDLGAGIYMSFYLLKSSLQEDADTMVELEPLESKNESCRSFVGRLN
ESLAVWGDRLPVEARVAYSKMAEEICDMLLSDLSKDPSRETQLSCFETAFDAPLPEDVRS
THLQDAVSLFSLYLSESGQISA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgttcaaccatttcgagagacttcatggatggctggaaatttggactcgcaa
aagaaaagaaggatctccttaggtggagttactgccctaagtgaagagataactgattca
ttgcctatgttaaattcacctgactacttcttgaagccatgcatgttggagttggttgag
cgagaaattgagaaccctggttattgcagcagggttcctgatttcacaattggtaggatt
ggttacggttatatcaagtttcttgggaatacagatgttacaaggttagacctggatcag
atagttcagtttcaaaggcacgaggtgattgtttatgatgatgagagctctaagccagtt
gttggcgagggacttaacaaggctgctgaggtgactctggtcgtaaacataccaaatcta
acaactttggggaaagtgcaagttgaccatattgcttataaattaaaacagagcgctgaa
agacaaggggcaacttttatctcatttgatcctgataatggattatggaaatttttggtt
cctcatttcagcagatttgggttgagtgatgatgaggcagaagatattgctatggatgat
gccccaggtttgggagatcccgtaagactggatggggacaaggtagctgacattgttgaa
gaacatcagatggaaacttccgagccagagctttctcactctcttcctgctcatctagga
cttgatcctagaaagatgaaagaaatgagaatgctgatgtttcctagtgaagatctaaac
gaagctgatgattttagagagcaaacttcccatcatatggcatccttgacgaaacaaaat
gtaagaccttcacagaaaatttctcaaagaaatagtcttcaagatactccaccagtcttg
cggaaaactccgcttgctttactggagtataaccctggtaatgataaaagctcccctggt
agtatcctgatggtccaacaaaataagaatctgtcagtgaaaaagtcgaaaatgggaggc
ttcgagctagacatcagccatgtaacgccattatctgataactattctcgcaatgttgtg
gatgcagcattgtttatgggaaggtctttccgagcaggttggggaccaaatggcgtcctt
tttcacactggtaagccaatatgtagctccagttctcagatggtattgtcttctgtggtc
aataaagaaaagatagcaattgacaaagtggtttgggatagaaaggaaaatgttcagaaa
gaacttattgattctgcattcgaggctcccttaagtctccacaaggcattaaaacatcaa
gaagaagaagttacgtttggctctttcagtcttaaacttcagagagtggtcactgatcgt
gtagttctatcagatatctgccgacactatattggtgtaatcgagaaacagctggaggtt
gctgggttgtcaagatctgcaaagctgtatacgatgcaccaagtcatggtgtgggaactc
ataaaagttctcttttctgacagacagagtactgaaacgttgaattatgcagcttctgat
aatgaggaagacatgatgcaagatgtgaaggaagattctgcagaagttaatacagaagct
cttccagttatccgaagagcagaatttagttattggctccaagaaagtgtcagtcaccgt
gtacaagaagatgtgagtgatctaaatggttctggctacctggagcacttattctttctt
ctgactggacgagagcttgattcagcagtggaacttgccatatctaagggagatgttaga
cttgcttgtttgttgagccaggctggtggatcaactgtaaaccgcaatgatatcttgcag
cagcttcacctttggagaaggaatgggctggattttaattacatcgagaaggagagaatt
aagctttacgaattgcttgctggtaatatccatgatgcattacaagattttacaattgac
tggaagagattcctagggttgttaatgtggcatcatctacctcccgacagttcattacct
gtcatcttcagaaattatcaactcctactagatcaggcaaaagccccgtggcccgtcccg
atatatattgacgaaggacctgcagatgggtttgtaagcaacaagaagcgttctgacctt
ttgtattatcttatgcttctgcacagcaaagatgaggaagaaattgatttcctgaagact
atgttcagtgcattctcttcaactgacgatccacttgactatcatatgatctggcaccat
cgaggaatcctagaggcagtgggagctttcacttcagatgatcttcacactctcgatatg
gggtttgttgcacagcttctctctcagggcctttgtcattgggctatctacgttgtcctt
cacatacccttccgtgaaggtcaaccatatctacacgtcattgtcattcgggaaatcctg
tttcagttctgtgaaatatggagttctatggaatcacaacggcaatttattaaggacttg
ggtatcccttctgaatggatgcacgaagctctggcagtttactacaattaccatggagat
ttcacaaaggctcttgaccactttattgaatgtgcaaactggcaaagagctcattccatt
tttatgacgtcagttgcccattcattatttttgtcagctaaccattcagaaatatggaga
attgctacttcaatggatgatcgaaaatctgagattgaaaactgggatttgggtgccggg
atatacatgtcattttatttacttaagagttcactgcaagaagatgctgatacgatggta
gaactggaaccccttgagagcaaaaacgagtcttgcagaagttttgtcggtcgtttaaac
gaatcattggctgtttggggtgacagattaccagttgaagctagagtggcatattcaaag
atggcagaggaaatatgcgatatgcttctgtcagatctaagcaaggatccaagtcgagag
actcagctaagctgttttgagacagccttcgatgccccattgccagaagatgtgagatca
acgcatctgcaagatgctgtgtcactattctctctatatttgtcagagagcggccaaatc
tcagcttag
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integrated database retrieval system
