Camelina sativa (false flax): 104752534
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Entry
104752534 CDS
T05044
Name
(RefSeq) coatomer subunit beta'-1
KO
K17302
coatomer subunit beta'
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104752534
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104752534
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104752534
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104752534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
WD40_like
Beta-prop_Vps41
TPR_CcmH_CycH
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD_LRWD1
TPR_2
HEAT_GCN1
TPR_8
Beta-prop_WDR75_2nd
TPR_12
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
104752534
NCBI-ProteinID:
XP_019083578
LinkDB
All DBs
Position
7:complement(30310558..30317070)
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AA seq
929 aa
AA seq
DB search
MPLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTMVKSFDVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHMKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKLG
REIPVASMDNSGKIIWAKHNEIHTVNIKSVGTDEVTDGERLPLAVKELGTCDLYPQSLKH
NPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEVVWSSDGEHAVRESSTKIKIFSKNFQE
KKTVRPTFSAEHIFGGTLLAMCSSDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIA
SESSFYILKFNRDIVSSYFDGGKQIDEEGIEDAFELLNETNERVRTGLWVGDCFIYTNSS
WRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVIGYTLLLSLIEYKTLVMR
GDLEQANEVLPSIPKEHHNSVAHFLESRGMIEDALEVATDPDYRFELAIQLGRLAVAKDI
AVEAQNESKWKQLGELAMSTGKLDMAEECMRHAMDLSGLLLLYSSLGDADGLMKLAALAK
EQGKNNVAFLCLFMLGQVEDCLHLLVESNRIPEAALIARSYLPSKVSEIVALWRNDLTKI
SPKAAESLADPEEYPNLFEDWQVTLSLENRAAETRGVHPPAGQYCSHADRDRTTLVEAFR
IMQIEEEGRLEQGDVLNEVGEEGEEGEGEEEEEDHQEESSDGRQQNVEEEAVVVDADSTD
GVVLVNGNGVVLVNGNESEEQWVLTPPQE
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagacttgaaatcaagcgcaaatttgctcaaagatcagaaagagtcaaatct
gtagatctccatccaacagagccatggatcctggcaagtttgtattccggaactgtgtgc
atatggaattatcagacacagacaatggttaaatctttcgacgtgactgaattgcctgtt
cgctcagctaagttcattgcacggaagcagtgggttgtagctggagctgatgacatgttc
attcgtgtctacaactacaacactatggataagatcaaagtatttgaggctcatgctgat
tacattaggtgtgttgctgttcatcccacccttccctatgtcttatcatcatctgatgat
atgctcatcaagctctgggactgggaaaagggttggctttgcactcagatttttgaaggc
cattcccattatgttatgcaagtcactttcaatccgaaagataccaatacttttgctagt
gcatcccttgaccgtaccattaaaatctggaatcttggttctccggatccaaattttact
ttggatgcacatatgaaaggcgtaaactgtgtagactactttactggtggggataaacca
tacctaatcactggatctgatgatcatactgccaaggtgtgggattaccaaacgaagagt
tgcgttcagacacttgaaggtcatacacacaatgtttctgcggtttctttccatccagag
ctcccaataattattactggatctgaggatggaactgttcgcatatggcatgccaccact
tacaggcttgagaatacgttgaactatggccttgagagggtttgggctattggacacatt
aaaggttcacgccgggttgtaatcggttatgatgaaggatccataatggtgaaacttggc
cgtgaaataccagtagctagtatggataacagcggaaaaattatttgggctaaacacaat
gagatacatactgtaaacatcaagagcgttggcacagatgaggtcactgatggtgagaga
ctgcctttggctgttaaagagttagggacctgcgatctttatcctcaaagcttgaagcac
aaccctaatggtaggtttgtggttgtttgtggagatggtgagtatatcatctacactgcc
ttggcttggcgaaataggtcatttggctctgcgctggaagttgtttggtcatctgatggg
gagcatgctgtcagggaaagctcgacaaagatcaagatcttcagcaagaatttccaggaa
aagaagactgtgagacctactttctcagcagagcacatttttggtgggacattattggca
atgtgctcaagtgattttatctgcttctatgattgggctgaatgtcggttgattaggcga
atagatgttactgtcaaaaatctttattgggcagacagtggtgatctcgttgccattgcc
agtgaatcatcattctacatccttaagttcaatcgcgacattgtttcctcttattttgat
ggcggtaaacaaattgatgaggaaggcattgaggacgcatttgagcttctcaatgaaacc
aatgaacgtgttcggactggcttatgggttggagattgttttatctataccaattcgtct
tggaggcttaactactgtgttggtggtgaggtaacaacaatgtatcatctggaccgtcct
atgtacttgttgggttatctcgctaatcaaagccgggtttatttgattgacaaagagttc
aacgttattggttacactttacttttaagtttgatcgagtacaagactcttgtgatgcgt
ggagatttggaacaggctaatgaagtcttaccttcaattcctaaggagcatcataatagc
gtggcacactttctggaatcacgtggtatgatagaagatgctctagaagtagctactgac
cctgattacagatttgagttggcgatacagctcggtagattggcagtcgcgaaggacatt
gctgtagaggcacaaaatgagtctaaatggaagcaacttggagaattagctatgtccact
gggaagttggatatggctgaggaatgcatgaggcatgctatggatttgagtggcctgttg
ttgctttattcttcattgggagatgcagatggattgatgaaactggcagcacttgctaaa
gagcaaggaaagaacaacgtcgcttttctttgcttgttcatgttgggtcaagtagaagat
tgcctgcatctgttggtggaaagtaatcggatacctgaagccgctctgattgcacgatcg
taccttccgagcaaggtctctgaaatagtggcattgtggagaaacgatttgaccaagata
agtccaaaggctgctgaatctctggctgatcctgaagagtatcccaatctctttgaagac
tggcaagtcaccctgtcccttgaaaatagagctgcagagacaaggggcgtccaccctcct
gctgggcagtactgtagtcatgcagacagagatcgtacaactttggtggaagcttttaga
ataatgcaaatagaggaagaggggcgactagagcaaggggatgttctcaacgaggttggg
gaagagggagaagagggagagggagaagaagaggaggaggatcatcaggaagagagtagt
gatgggaggcaacagaatgtggaagaagaggctgttgtggtggacgctgactctacggat
ggggttgtgctagtaaatgggaacggggttgtgctagtaaatgggaacgagtctgaagaa
cagtgggttctaacaccgccacaggagtag
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