Camelina sativa (false flax): 104752683
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Entry
104752683 CDS
T05044
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104752683
Membrane trafficking [BR:
csat04131
]
Protein recycling
Others
EARP complex
104752683
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
104752683
NCBI-ProteinID:
XP_019093935
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Position
16:26741043..26750150
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AA seq
1134 aa
AA seq
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MQPNLFPFGTVLSNPFLFNGGDLNELGSGAGFESSRVFFLLPFLLSQGGSGGMDLSKVGE
KFLSSVKSATSLGLLPSPPSFSDRPEIPARAAAAAAVARALAGLPSDQGLSISSTATELS
SIYGNRPLPQQVEELEQGFYEEDFDSVMHILENVPNDQSELAYFEKQATLRLVQLDRVAE
DLSHHVMEHHEVMVKGMNLVRELEKDLKIANVICKNGRRNLTSSMNEASRDLIVHNHSKK
KQALLDMLPILTDLRHARVMRSTLEDLVEEGNYCKAFQVLSEYLQLLDSLSEFSAAQEMT
RGVEVWLGRTLHKLDSLLLGVCQEFKEDSYVMVLDAYALIGDVSGLAEKIQSFFMQEVIS
ETHSVLKTIVGEDNSAATQYSRLTYSDLCLQTPESKFRQCLLRTLAVLFQLIYSYHEIMS
FTPEMKVESLISPSSATTQMVDSVTRSSCDPQDGGLSSAMSSGSIPSCTMSAEESDGSGT
SSSVQQVLQASDSAIGEPRDSGDAVSCGESPWYYLRKESAAFVSETLQRGRRNLWQLTTS
RVSVLLSSPGASSTSIHQFLKNYEDLSIFILAGEAFCGFEVVDFREKLKGVCENYFTAFH
RQSMHALKMVLEKETWTKLSPDTVQTINFAGLVGDGAPLIISSRNATGSSRFPHSNKSNN
SVDPSGNRSGFSYWLKSGNPFSAKLTHYREDQDCSSVNGAISRDDEGNDSIHDDVVNPKI
RDKKRVNGGSPVSEDENEDLLADFIDEDSQLPRRSFTRSQSRTSSSHFSTNDDLTAQTGS
SLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVFQVFGQENTNLGGKGFADSI
NHRLKSSLSRISQECEQWIKPHLSSSPSSSLAFPNTVHSLADVTPANPLNTSGHLSGVSF
SLKERCAAVDTVSLVARILQKSKAHLQSMLMSRNGSLVEDFFGQLVDSVPHLTEHLHRTT
ARILLHVNGYVDRIANSKWEVKELGMEHNGYVDLMLGEFKHYKTRLAHGGIPPEVQNRLL
GYGVEIFAEILVEGLSRIKRCTNEGRALMLLDFQVLINGLQHFVPTNVKPKLQIVETFIK
AYYLPETEYVHWARGRPEYTKAQVVGLVNLVATMKGWKRKTRLEVIEKIESASA
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctaatctcttcccattcggcacagttttgagtaatccattcctcttcaatggc
ggagatctaaacgaacttggttctggtgctggattcgagagctctagggttttcttccta
ctcccttttttattatcccaaggcggcagtggtgggatggatttgtccaaggttggtgaa
aagttcctcagctctgttaaatccgctacttctcttggtctcttaccttctcctccttcc
ttctccgatcgtcctgagattcctgcacgtgctgcagctgctgctgcggttgctcgtgct
ttggctggactaccttctgatcaggggttgagtatatcttctactgctactgagcttagt
tcaatttatgggaatagacctcttcctcaacaagttgaagagcttgaacaagggttttat
gaagaggattttgattcggtaatgcatattttggagaatgtgccgaatgatcaaagtgag
ttggcttattttgagaagcaggccaccttgaggttggttcagctggatagagtggctgaa
gatctgtctcaccatgttatggagcatcatgaagtaatggtgaaggggatgaatttggtt
agagaacttgaaaaagatttgaagattgcaaatgtcatctgcaagaatggaagacgaaat
ttgacttcttctatgaatgaggcctccagagatcttattgtacacaatcattccaaaaag
aaacaggctcttctggatatgcttcctattctaaccgatctccgccatgcaagagtaatg
cggtcaactcttgaagaccttgttgaagaaggaaactattgcaaggcgtttcaagttcta
tcggagtatttgcagctgcttgacagtctatctgaattctcagcagcccaagagatgacc
cgtggtgttgaggtttggttaggaagaactcttcataagctggattcactattgttgggc
gtttgccaggagttcaaagaagatagttatgtaatggtccttgacgcttatgcactgatc
ggtgatgtctctggtcttgccgaaaaaatacaaagcttctttatgcaagaagttatctca
gaaacccactcagtgctaaagaccattgttggggaggataacagtgctgccacccaatat
agtagacttacctacagcgatctatgccttcagacaccagaatccaagtttaggcaatgt
ctattgagaacactagctgtgctgtttcagttaatatattcataccatgagataatgagt
ttcacgccagaaatgaaggtagaaagtttgatctcaccaagttctgcaacaactcaaatg
gttgattcagtaactagaagttcatgcgacccacaggatgggggcctctcatcagccatg
agttctggaagtataccttcttgtacaatgtctgctgaagagtctgatggaagtggaaca
tccagttccgtgcagcaggtgctgcaggcgtctgatagtgcaataggtgagcctagagat
tctggagatgcagtgtcatgtggcgagtcgccatggtactatctacgaaaagaaagtgca
gcttttgtttcagaaactcttcagagaggacgaagaaatctttggcaacttacaacgagc
cgtgtctcagttttgctctcttcaccaggtgcttcatcaacaagtatacatcagttccta
aaaaattatgaagacctgagcatctttatccttgctggggaagcattctgtggatttgaa
gttgttgattttagggagaagctaaagggtgtatgtgaaaattatttcactgcgtttcat
agacaaagcatgcatgcgcttaaaatggttctggagaaggagacatggacaaaattgtct
cctgatactgtgcaaactattaattttgctggtcttgtgggggatggggctcccctaatt
atttcttcccgcaatgccactggttcttccagattccctcactcgaataagtcaaataac
tcggttgatccaagtggtaacaggagtggattttcttattggctgaaaagtggaaacccc
ttctcagcaaagttaactcactatagagaagatcaagactgctcttcagtcaatggagct
atatctcgagatgatgaagggaatgatagtattcacgatgatgttgtgaatcccaagata
agagataaaaaacgcgttaacggaggtagtccggtttcagaagatgaaaacgaagacctt
cttgctgattttattgatgaggatagtcagcttccaagacgaagttttacacgtagtcaa
tcaaggacttcatcttcacatttcagtactaatgatgatttgacagctcaaacaggatcg
tccctttgtcttctaagatcaatggataagtacgcgaggcttatgcagaaactagaaatt
gttaacgttgaattctttaagggaatatgccaattgtttggggtctttttctattttgta
tttcaagtatttggtcaagaaaatactaatttaggtggaaaaggattcgctgactctatc
aatcatcgtttgaaaagcagcttatcccggatatcacaagagtgtgagcaatggataaaa
cctcacctttcatcatcaccttcttcttcacttgcctttcccaacaccgttcatagtctt
gcggacgtgactccagcaaatcccttaaatacttctggtcacttatcaggcgtatctttt
agtctcaaggaaagatgtgctgcagtggacactgtttctcttgtggctcggatattacag
aaatcaaaggctcatctccaatcaatgcttatgtcaagaaatggctctttggttgaagac
ttctttggtcaactggttgattccgtccctcatctgacagagcacttacataggacaact
gcgaggatactgctgcatgttaatggatatgtcgaccggatagctaattctaaatgggaa
gtcaaggagcttggaatggagcataatgggtatgttgatttaatgctcggggaattcaaa
cactacaaaacaaggcttgctcatggaggcattccaccggaggtccaaaaccgcctactg
ggatatggagttgaaatatttgcggagattctggttgaaggtttatcacgaataaaaaga
tgtactaatgaaggacgtgctctcatgttactagattttcaggttctaataaacgggcta
cagcactttgtgcctacaaatgtgaagccgaagttacaaatagtcgaaacatttatcaag
gcatactatctgccagagacggaatatgttcactgggcaaggggtcgtccggaatataca
aaagcacaagtcgttggactggtgaatttggtagccaccatgaaaggttggaaaaggaaa
acgcggctggaagttattgagaagatcgaatcagcttctgcgtag
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