Camelina sativa (false flax): 104753420
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Entry
104753420 CDS
T05044
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104753420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104753420
03036 Chromosome and associated proteins [BR:
csat03036
]
104753420
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
104753420
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
104753420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
eIF2A
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Ge1_WD40
RMC1_N
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_DCAF4
CFAP43_N
MIOS_WD40
Beta-prop_IFT80_2nd
Beta-prop_VPS8
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
104753420
NCBI-ProteinID:
XP_010473977
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All DBs
Position
16:complement(5917165..5918341)
Genome browser
AA seq
369 aa
AA seq
DB search
MYRNIDCRDFPSSSICSLNHFSPLSPHQITSLWLSLFSLSIQILLNVSFSLQADDFYLNL
LDWGSDNVLAIALHHTVFLWDASKGSTTEIVTVDEDTGPVTSINWAADGRCLAVGLNSSQ
VQLWDCADCRRVRTLECGHESRVGSLAWNDHILTTGGADGKIINNDVRVSSHVVNTYRGH
TLEVCGLKWSGSGQNLASGGNDNAVNIWDRSSSSQRLHRLVEHTSAVKALEWCPFQTSLL
ATGGGGRDGRIKFWNTRTGACLNTVETGSQVSSLLWSNKERELLSSHGFTQNQLTLWKYP
SMVKMAELNGHTSRVLYTALSSNGCTVASAGADERLMFWNVFGVPEVAKKAAPKKVVVPE
AFSHVNRIR
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaaatatcgattgccgtgactttccttcttcttctatctgtagtcttaatcac
ttctctcctctcagtcctcatcaaatcacctctctctggctctctcttttctctctatca
atccaaattttacttaacgtttcattctctctgcaggccgatgacttttatctcaacctg
cttgactggggcagtgataacgttctagccatagcattgcatcatactgtttttctctgg
gatgcttctaagggttctactactgagattgtcactgttgatgaagatacgggacctgtc
actagtatcaactgggcagcagatggtcgttgtcttgctgttgggcttaacagctctcaa
gtccagttatgggattgtgctgattgtcgtagagtgagaacgttggagtgtggtcacgag
tctagagtaggatcgttggcatggaacgatcacatcttgacaacgggaggagcggatggg
aagatcatcaacaacgacgtacgcgttagttcacacgttgtcaatacgtacaggggtcac
actttagaagtttgtgggttgaagtggtcaggatctggacagaacttagccagtggtggc
aacgacaatgcggttaatatatgggaccgttctagtagctctcagcggctgcataggctt
gtagagcacacatctgcagttaaagctcttgagtggtgccctttccaaacgagtttgctt
gcaactggtggcggtgggagagatgggagaataaagttctggaatactaggacaggagct
tgcttgaacacggtggaaactggctctcaagtttcttctttgttatggagcaacaaggaa
agagagttgcttagctcacatgggtttactcaaaaccagcttacactttggaagtaccca
tctatggtgaaaatggctgagctcaatgggcacacatcacgagttctatatacggccctg
agttcgaatggttgtaccgtagcttctgcaggagcagatgagagactgatgttttggaat
gtctttggagtaccagaggttgccaaaaaagctgctccaaaaaaagtagtagtacctgag
gcattttctcatgtgaaccgtattcgctga
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