Camelina sativa (false flax): 104753789
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Entry
104753789 CDS
T05044
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase-like
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104753789
Enzymes [BR:
csat01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
104753789
Transfer RNA biogenesis [BR:
csat03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
104753789
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
FAM219A
Motif
Other DBs
NCBI-GeneID:
104753789
NCBI-ProteinID:
XP_010474289
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Position
16:18219983..18223411
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AA seq
605 aa
AA seq
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MEDIEDLLAGGVGGAPPGFRLPLNAVGINPKTNKSKRSVTKQDQITTASNRDSLAPPSLT
IPGTQTIYIKTFGCSHNQSDSEYMAGQLTAFGYALTEVPEDADLWLINTCTVKSPSQSAM
STLITRGRSGKKPLVIAGCVPQGSRDLKELEGVSVVGVQQIDRVVEIVEETLKGHEVRLL
TRKTLPALDLPKVRKNNFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVDRVRTVI
SEGVKEIWLSSEDTGAYGRDIGVNLPVLLNAIVKELPSDQSTMLRIGMTNPPYILEHLKE
IAAVLRHPCVYTFLHVPVQSGSDSVLTAMNREYTASEFRTVVDTLTELVPGMQIATDIIC
GFPGETDEDFSQTVELIKDYKFPQVHISQFYPRPGTPAAKMKKVLSKVVKQRSRELTSVF
EAFASVQFFDPIFMLGISLHSFLFDVIWVGHTKGYIQVLVTGPESMLGSSAMGRITSVGR
WSVFGEVIETLSSANRETQAKEKTKPPCSSNVSTCETCACSAESCCGEERSGEAYNISEN
ISKQDNDQKVKSKKEGKEIQEVDVPRSGVANWGFIDKALVCGVFVSSLTILVLLISVAIR
VLLRQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaggatatcgaggatttgttggccggaggagtcggtggtgcaccaccgggattccga
ttaccgttgaatgctgtcgggataaatccgaagacgaataaaagcaaacgtagtgtcacg
aaacaggatcagattactactgcttcgaatcgtgactcgcttgctccaccatctttgacg
attccgggaactcagacgatatacatcaagacgtttggatgttctcataaccagagtgat
agtgagtatatggctggtcagcttactgcatttggctatgcgttgacagaagtccctgag
gatgctgatttatggctcattaacacctgtactgtgaagtctcctagtcagtctgcaatg
tctactcttataacgaggggtagaagtgggaaaaagcctcttgtgatagcgggatgtgtt
cctcaaggcagtcgtgatcttaaagaactggaaggtgtaagtgtagttggagtccaacag
attgatcgtgttgttgagattgttgaagaaacactgaagggtcatgaagtgcggcttctt
actcgaaagactttgcctgcgcttgatctcccaaaggtgcggaagaacaattttatcgaa
attctccccattaatgttggttgtttgggtgcctgtacttactgcaagaccaagcacgcc
cgtggtcacttaggaagctacacagttgatagtcttgtggatcgggtgagaactgtcata
tctgaaggggttaaggagatatggttgagcagtgaggacactggagcatatggtcgtgat
ataggagttaatcttccagtgctgcttaatgctattgttaaagagcttccttctgatcaa
agcacaatgctaaggattgggatgactaatcctccctatattcttgagcatttgaaagaa
atagctgctgttttacgtcacccatgtgtttacacctttctacatgtccctgtacaatcg
ggcagtgattctgtgttgacggccatgaacagggaatatacagcaagtgagttcaggact
gtggtagacaccttaacagaacttgtgccaggaatgcaaattgctactgatataatatgc
ggctttcctggtgaaaccgatgaagatttttctcaaacagttgaacttatcaaggattac
aagtttcctcaagttcatatttctcagttttaccccagaccagggaccccagcagcaaag
atgaagaaggtactaagtaaagtagtgaagcaacgaagccgtgaattgacttctgtcttt
gaggcttttgcntctgtacagttctttgatcctatatttatgcttggtatttcattacac
agtttcttgttcgacgtcatttgggttgggcatacgaagggatatatacaggtcttagtt
actggaccagaaagtatgctcgggagttcagctatggggaggataacatctgttgggaga
tggtcagtgtttggggaagtgattgagacacttagctctgcaaacagagaaacacaagcc
aaagagaaaacaaagccgccttgttcgtcgaatgttagcacttgtgagacttgcgcttgc
tctgctgagagctgctgtggagaagagagatcaggagaagcatataacatctctgaaaat
atctcaaaacaggataatgatcagaaggtaaagtcaaagaaagaagggaaggagattcaa
gaggtcgatgtaccgaggagcggtgtagcaaattggggtttcatcgataaggcacttgtg
tgtggagtgttcgtaagttctctcaccattcttgttttgttgattagcgttgcaattaga
gttctgttgcgtcaataa
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