Camelina sativa (false flax): 104754278
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Entry
104754278 CDS
T05044
Name
(RefSeq) protein TSS-like isoform X1
KO
K03255
protein TIF31
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
csat03012
]
104754278
Translation factors [BR:
csat03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104754278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_8
CLU
Motif
Other DBs
NCBI-GeneID:
104754278
NCBI-ProteinID:
XP_010474724
UniProt:
A0ABM1R7H2
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All DBs
Position
17:complement(374472..387753)
Genome browser
AA seq
1792 aa
AA seq
DB search
MAPKNNRGKTKGDKKKKEEKVLPVIVDVIVNLPDETEAILKGISTDRIIDVRRLLSVNFD
TCHITNYSLSHEVRGSQLKDTVDVSALKPCLLTLTEEDYNEGTAVAHIRRLLDIVACTTC
FGPSPEKSESVKSAQVKGGGKNSKHSETSPPPSPASKDAVIDDAGETSHSFPKLGSFYEF
FSLAHLTPPLQYIRLVTKRDTEDLSAEDHLLSIDVKLCNGKLVHIEGCRKGFYSIGKQRI
ICHSLVDLLRQISRAFDNAYSDLLKAFSERNKFGNLPYGFRANTWLIPPTAAQSPAAFPP
LPVEDERWGGNGGGQGRDGSYDLVPWSNEFAFIASMPCKTAEERQVRDRKVFLLHNLFVD
VATFRAIKAVQKVMTEPLLDQEDSEVLYSETTGDLSVTVTRDTSNASSKVDTKIDGIQAT
GLDKKKLMERNLLKGLTADENTAAHDVATLGTISLKYCGYIAVVKIEKESEELSPPSQIV
DLLEQPEGGANALNINSLRFLLHKSSSEQNKKTPHQQDDELTSSREFVSKMVEESIVKLE
EEDIDRESIMRWELGACWIQHLQDQKNTEKDKKQNSEKSKNELKVEGLGKPLKSLNSSKK
KTDVSSPKTTQTAVSSQVDAVSSETDNSATTASLQSDAEKNAQENVLVLKNLLSDAAFTR
LKESDTGLHHKSLQELVDLAQNYYTEVAIPKLVADFGSLELSPVDGRTLTDFMHTRGLRM
RSLGYVVKLSDKLSHVQSLCVHEMIVRALKHILQAVISAIATDTDNIAIKVAAALNMMLG
IPENTAAPPQNTWNVHPLIFRWLEKFLKKRYDYDLNAFSYKDLRKFAILRGLCHKVGIEL
IPRDFDMDSPAPFRKTDVVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTK
ALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMK
SYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVA
LRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYHLSVQHEQTTLRILRAKLGPD
DLRTQDAAAWLEYFESKAFEQQEAARNGTPKPDASIASKGHLSVSDLLDYINPSHNAKGK
ESVAAKRKNYIMKLKEKSKQSNVSEHLAEVPREKQKVMSEEETEETESEEGKSSEENHEA
SLAPVEEPPSPPAIEEATMDYSNPITSSEVSAEPQHPDGSEDGWQPVQRPRSAGSYGRRM
KQRRASIGKVYTYQKKNVEADIDNPLFQNATQQNGKYYILKKRTASYASYGDHQSPGLTA
QGTKFGRKIVKTLAYRVKSMQPSSGNTKTAGETSEEDGLKTDASSVVPATQSSTVQSEAY
HTKNSVVSLGKSPSYKEVALAPPGSIAKYQVWAPQNEASDKQEGDEMERKIEHGTRDEQM
ITGLQEEVKTEISANMESTKTQGEEEIKVELQPSEVIVEGNILNENEESGGGIHVEEQVE
GELINDGVTDIIRSTAEQEMADQLAADTEDLKEKLLISATDSSDPSRILLPNKKLSASAA
PFNPSSPPSIIRPTPIGMNIGPSWPVNMTLHHGPPPPYPSPPSTPNLMQPMSFVYPPPYT
QSVPTSTYPVTSGPFHPNQFPWQLNVSDFVPRTVWPGCHPVEFPPPHMITEPIAATVLEP
TVILPTDIDTSGVEEGTKKEEEEEGKRDVAIADEVMDPVNHVSNAVARSEMENGNRKSED
GEKTFSILLRGRRSRKQTLRMPISLLKPYDSQPFKLGYSRVIRDSEAPRSVA
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaagaacaaccgtggaaagactaaaggagacaagaagaagaaggaagagaaa
gttctcccggttatcgtggatgtcattgtaaaccttcccgatgaaacggaggctattctc
aagggcatatcaacggacaggatcatagatgttcggcggcttttatcggttaacttcgac
acttgccacatcaccaattattcactctcccatgaggtcagaggatcgcagttaaaagac
acagtggatgtttccgcgcttaaaccgtgtcttctcacgttaacggaagaggattataat
gaaggaacagcagtggctcacatcagacgactgcttgacatcgtcgcctgcacaacttgc
tttggtccttcgccggagaaatccgaatccgtgaaaagcgctcaggtcaagggaggtgga
aagaattccaaacattcggaaacttcgcctccgccgtctcctgcgtccaaggatgcggtg
attgatgacgccggagagaccagccactctttccctaagcttggaagcttctacgagttt
ttctctctcgctcacctcactcctcctcttcaatatatacgccttgtgactaagcgggac
accgaagatttatcggcggaagatcatcttctctccatcgatgtgaagctttgtaatggg
aagctcgttcatattgaaggttgcaggaaaggattttacagtattgggaaacagagaatt
atatgtcatagtcttgttgacttgcttagacaaattagtagagcctttgataatgcttac
agtgatcttctgaaagcgttttcagagcgcaacaagtttggaaatcttccatatgggttt
agagctaacacatggctcatccctcctactgcggcgcagtcaccagcagcgtttccgcct
ctccctgtcgaggatgagagatggggagggaatggtggtggtcaagggagagatggcagc
tacgatttggttccatggtccaacgagtttgcctttattgcatctatgccttgcaagaca
gcagaggagagacaagtcagagacagaaaagtgtttcttcttcacaacctctttgtcgat
gtcgcgactttcagagccatcaaggctgttcagaaagtaatgactgagccactgctggat
caagaagactctgaagttctatattccgagacaactggagacttgagtgttacggttaca
agggatacttctaacgcaagtagtaaagtggatacaaaaattgatggaatccaagccact
ggtctggataaaaagaagctgatggaacggaaccttctcaagggacttactgctgatgaa
aatactgctgcccatgacgttgctactttagggactataagtcttaagtattgtggttac
attgctgttgtgaaaatagagaaggagagtgaggagttaagcccaccttctcaaattgtt
gacctccttgaacagcctgaaggtggtgctaatgcactaaacattaacagtttgagattc
cttctccataaatcctcttctgagcagaacaaaaaaacacctcatcaacaagatgatgag
cttacatcttcacgggaatttgtaagtaaaatggtggaagaaagtattgtaaagcttgaa
gaagaggatatagacagggagagtatcatgagatgggagcttggtgcttgttggatacag
catttacaagaccaaaagaatacggaaaaggacaaaaaacaaaacagtgaaaaatccaag
aatgaattgaaggttgaaggacttgggaaaccgcttaagtccctcaatagcagcaaaaag
aaaacagatgtaagtagccctaagacgacgcagactgcagtatcgtctcaggttgatgcg
gtttcttcagagactgataattctgcaacaactgcatctttgcaatccgatgccgagaag
aatgcccaagaaaatgtactcgtcttgaagaatttgctgtctgatgcagccttcactcgc
ctaaaagagtcagatactggacttcatcacaagtctttgcaagaacttgtcgacttggca
cagaactattatactgaagttgctattccgaaactggttgcagattttggttcgttggag
ctctccccagtcgatggtcggactctaactgattttatgcacacaagaggtcttcggatg
cgttccttaggatatgttgtaaagctttcagataagttgtcacatgtacaatcactgtgt
gttcatgagatgattgtaagagcccttaaacatatcctccaggcggtgatttctgccatt
gctactgacactgacaatatagctataaaagtagctgctgctttgaacatgatgcttggg
attcctgaaaatactgcagcaccaccacagaacacttggaatgtacatcctctgatcttc
cggtggttggagaaattcttgaagaagcgatatgattatgatcttaatgccttcagttac
aaggatctacggaagtttgccattctccgtggattatgccataaggttggtattgagttg
attccaagggactttgacatggattctccagcaccgtttcggaaaacagatgtggtcagt
ctggtcccagtgcataagcaagcagcatgttcatctgctgatggaaggcaacttctggag
tcatctaaaacagctttagacaaaggaaagcttgaagatgcggttacctatggaacaaag
gctcttgctaaacttgtggcagtctgcggtccctatcacagaatgacagccggagcttac
agtttacttgctgtagttctatatcacactggtgactttaaccaggctacaatatatcag
caaaaggctttagatatcaatgagagggaacttggacttgatcatccagatacgatgaag
agttatggtgatcttgctgtcttctattataggcttcagcatacagagctggctcttaag
tatgtgaagcgcgcgttgtatctcttacatctcacatgcggtccatctcatccaaacact
gctgctacatacatcaatgtagccatgatggaggaaggtctaggaaatgtacatgttgcc
ttgaggtaccttcacaaagctctcaagtgtaatcaaaggttgcttggtcctgatcacatc
cagactgctgcaagttaccatgccatagcaattgcactctcgttgatggaggcataccat
ttaagtgttcagcatgagcaaacgaccttaagaatcctccgagcaaagcttgggccagat
gatttacgtactcaggatgcggctgcttggctagaatactttgaatccaaggcttttgaa
caacaagaagctgcacgaaatggaactcctaagccagacgcatctatagccagcaaaggg
cacctaagtgtatccgatctactcgactatatcaacccaagccataacgccaaagggaaa
gagagtgtggcagcaaagaggaagaactatattatgaagctaaaggaaaaatccaagcag
agcaatgtttctgaacatttagcagaagttccgagagaaaaacaaaaggtgatgtctgag
gaggagacagaagaaacggaatcagaagaaggtaaatcaagcgaagaaaatcacgaggca
agtcttgcaccagttgaagaaccaccttctcctccagccattgaggaggctactatggat
tacagtaatccaattacatctagtgaagtttcagccgagccacagcaccctgatggtagt
gaagatggatggcaaccagtgcaaagaccgagatctgctggatcatatggacgcaggatg
aagcagcgacgggcatccattgggaaagtatatacatatcagaagaagaatgttgaagct
gatattgataatcctcttttccagaatgctactcagcagaacggaaaatactacattctc
aagaagcgaacagcgtcatatgcaagctatggggatcaccaatctcctggtttaacagct
caaggcaccaaatttgggaggaagatagtcaaaaccttggcgtatcgggttaaatcgatg
cagccgtcttctggtaatactaagactgctggtgaaacttcagaagaagatgggttaaag
acagatgcttcttctgttgtgccagctactcagtctagtactgtgcaaagtgaagcctac
cacacgaaaaactctgttgtaagtcttggaaaatctccatcatacaaggaagtagcattg
gcaccacctggttcgattgccaagtatcaagtctgggctccacaaaatgaagcttcagat
aagcaagagggtgatgagatggagagaaagattgaacacggtacaagggatgagcagatg
attacaggtttacaggaagaggttaaaactgaaatttctgcaaacatggaatctaccaaa
actcaaggcgaagaagagatcaaagtagagttacaaccatctgaagtgatagttgaagga
aacattttgaatgaaaatgaagaatctggtggtggcattcatgtggaagaacaagttgaa
ggtgaattgataaacgatggtgttacagatataattcgttcaacggcagagcaagaaatg
gcagatcagttagctgctgataccgaagatctgaaggaaaaactgttaatatctgctaca
gactcaagcgatccctcccgaatattgttacctaacaagaagctatctgcttcagctgct
ccattcaacccatcatcacctccaagtataatacgtcctactccaataggaatgaacatt
ggaccgtcatggccagtgaacatgactctccatcacggacctcctcctccgtacccttca
cctccgtcaactccaaacttgatgcagccaatgtcttttgtttaccctcctccatacact
cagtcagtccccacaagtacttaccctgtaacaagtggcccttttcatcccaatcagttc
ccgtggcagctcaatgtttcggattttgtaccaagaacagtttggcctggatgccatcca
gttgagtttccccctccgcacatgatcaccgagccaatagctgcaactgtgttagagcca
actgtgattctgccaactgatattgacacttcaggagtagaagaaggcacaaaaaaggaa
gaagaagaagaaggcaagcgagatgtggctattgcggacgaagttatggatcctgttaac
catgtgagcaatgcggtggcacgcagtgaaatggagaatggaaaccgaaaatccgaggat
ggtgagaaaacttttagcattttgttaagagggaggagaagcaggaaacagacactgaga
atgccaataagtttgcttaaaccttatgattctcaaccgttcaagcttggttatagcaga
gttatcagagacagcgaggctccaaggtctgtagcctga
DBGET
integrated database retrieval system