Camelina sativa (false flax): 104754280
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Entry
104754280 CDS
T05044
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 10
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csat
Camelina sativa (false flax)
Pathway
csat04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
104754280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csat04040
]
104754280
Ion channels [BR:
csat04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104754280
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
104754280
NCBI-ProteinID:
XP_010474728
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Position
17:complement(389107..392805)
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AA seq
724 aa
AA seq
DB search
MMAFSHDNRVRFKDEDRSIASEYGYGRKARPSFDRVLKNVKWGIEKGSGNFKIFKKPSLS
SLPHKDPDHNKVQKETSGTTKKNIINPQDSFLQNWNKIFLFACVLALAIDPLFFYIPIVD
GTRHCLTMDSKLEIAASFLRTLIDAFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIA
LKYLSSYFIIDVLSIIPLPQIVVLAVIPSVKEPDSLLTKDYLMSVIIVQYVPRILRLYPL
YTEVTRTSGIVTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWQEACEKKNGCS
LSSLYCHGNGNAGNDYLTTSCPFLDPGDITNSTIFNFGIFTDALKSGVVESHDFWEKFFY
CFWWGLRNLSALGQNLQTSKFVGEIIFAISICISGLVLFALLIGNMQKYLESTTVREEEM
RVRKRDAEQWMSHRMLPEDLRKRIRRYEQYRWQETRGVEEENLLRNLPKDLRRDIKRHLC
LDLLKKVPLFEIMDEQLLDAVCDRLKPVLYTENSYVIREGDPVGEMMFVMRGRLVSATTN
GGRTGVFNSVDLKASDFCGEDLLPWALDPQSSSHFPISTRTVQALTEVEAFALMAEDLKS
VASQFRRLHSKQLQHTFRFYSVQWRTWSVSFIQAAWRRYCRKKLAKSLRDEEERLRDALA
REGDGTTASSSLSIGAALYASRFASNALRNLRHNISNLPPRYTLPLLPQKPTEPDFTANH
TTDP
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatggcattcagccatgataatcgtgtcaggttcaaagatgaagacaggtcaatagcc
tctgagtatggttacggaagaaaagctagaccttcttttgacagagttttgaagaatgta
aagtggggaattgagaaaggttcaggaaatttcaaaattttcaagaagccatcattaagt
tctcttccacataaggatcctgaccacaacaaggtccagaaggaaacatctggtaccact
aagaagaacatcattaacccacaagattcgtttctgcagaactggaacaaaatatttctc
tttgcttgtgtccttgctttggcgattgatccgctgtttttctacattcctattgtcgat
ggcacgaggcactgtcttactatggactcaaagttggagatagctgcgagttttcttcgt
acactcatcgatgccttttacattattcacattgtgtttcagttcaggacagcttacatc
gctccttcttctagagtttttggcagaggtgaactggtggatgatgctaaggcaatagcc
ttgaagtatctctcgtcttacttcatcattgatgtactttctatcattcctctcccacag
atagtggtcttagctgttattccaagcgtcaaagagcctgactctttgctcacaaaagac
taccttatgtctgtcataatcgttcaatatgttcctcggattcttcgtttgtatccgctt
tacacggaagtgaccagaacatctggcattgttactgaaacagcatgggctggagctgct
tggaacctctctctctatatgttagccagtcatgtatttggagctttatggtacttaatc
tcagtagaacgagaagacagatgctggcaagaggcgtgcgagaaaaagaacggttgtagt
ttaagttctctgtactgtcacggtaatggtaatgctggaaacgattacctgaccacctct
tgcccttttctcgaccctggtgatataacgaactcaaccatcttcaactttggcatcttc
actgatgctctaaagagtggggttgttgaatcgcatgatttctgggagaaatttttctac
tgcttttggtggggactgcgaaatcttagtgcattgggacaaaaccttcaaacaagcaaa
ttcgttggtgaaatcatctttgctatatcaatctgcatatctggactagtcttatttgcg
ctacttatcggcaatatgcagaaatacttggaatcaacaacagttcgagaggaggaaatg
agggtgagaaagagagatgcagagcagtggatgtctcatagaatgttacctgaagacctg
agaaaacgtatcagaagatatgaacaatatagatggcaagagacaagaggagttgaagaa
gaaaaccttcttcgtaacctccctaaagacctaagaagagatattaaacgccatctttgc
ctcgatctccttaagaaagtacctttgtttgagataatggatgagcagttacttgacgcg
gtttgcgataggctaaaacctgtgctctacacagagaacagttacgtgatacgtgaagga
gatcctgtaggggagatgatgtttgtgatgagaggaaggcttgtaagtgccaccactaat
ggaggaagaacaggggtcttcaattccgtggacctcaaggcaagtgatttctgcggagaa
gatcttctgccgtgggcattagaccctcaatcttcttctcactttccaatctcgacgaga
acagttcaagctctcaccgaagttgaagcctttgctctaatggctgaagatctcaagtct
gtcgcttcacagttcaggcgcctccacagcaagcagctccagcatactttcaggttttat
tcggtgcaatggagaacatggagcgtatcttttatacaagcagcgtggcggagatactgt
cggaagaagttagccaaatcattacgcgatgaagaagagcgtctccgagatgcgctggct
agagaaggcgatggtacaacggcgtcttcgtccttgagcattggagccgctctttacgcg
tcgcgttttgcgtcaaacgcgcttcgtaatctgaggcacaatatctccaaccttcctcct
cgctacacacttcctttgttacctcaaaaacccaccgaacctgacttcaccgccaatcat
acaactgacccttga
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