Camelina sativa (false flax): 104754450
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Entry
104754450 CDS
T05044
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104754450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104754450
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
104754450
Prokaryotic type
Archaeal type
TFE
104754450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
DUF8255
wHTH-PRTase_assc
DUF7836
DZR
A24_N_bact
Motif
Other DBs
NCBI-GeneID:
104754450
NCBI-ProteinID:
XP_010474948
UniProt:
A0ABM0WR20
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All DBs
Position
17:1070223..1073999
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AA seq
472 aa
AA seq
DB search
MDKSGPVQKTVVIQPFVKLVRLVARAFYDDYTTKSDNQQKSAKSDNRGIAAVVLDALTRR
QWVREEDLAKDLQLHAKQLRKIIRLFEEQKLIMRDHRKETAKGVKMYSAAVAATSDGRAE
DKVKLHTHSYCCLDYAQISDVVRCKLHRMKKKLKDELEDKNTVQEYGCPNCQRKYNALDA
LRLISMLDDSFHCENCNSELVVECNKLTSEEVVDGDDNGRRWRREKLKDMLQKLEAQLKP
LVDQLDRIKDLPIPEFGSFLAWEARAAMAARANGDLNPNDPLRSQGGYGSTPMPFLGETK
VEVNLGDGNEDVKSKGGDSSLKVLPPWMIKQGMNLTEEQRGEMRQEAKVDGGSGGAAKLS
DDKKSAIGNGDEKDIKDEYLKAYYAELLKQQELAARLNQQESAGELTPDIQLATTSPGRE
VGKKSKREEDDVEWEEEAPVAANGNYKVDLNVEAEASGGEEEEEDDVDWEEG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggataaatcaggcccggtgcagaaaaccgttgtgatccagccatttgtcaagttggtg
aggcttgtagcgagagctttctatgatgattatactacaaaaagcgataatcagcagaaa
tctgcaaagagtgacaacagagggattgccgctgtggtgcttgatgcgctgaccaggcgg
caatgggttagagaagaagacttggcaaaagatttgcagttacacgccaagcaacttcga
aaaataattagactctttgaagaacaaaaattgattatgcgtgaccaccggaaagagact
gcaaagggtgtaaagatgtatagtgctgcagtggctgctacaagtgatggccgagcagag
gacaaagttaagctccacactcactcgtattgttgtctcgattatgcacagatatctgat
gttgttcgttgtaaactgcaccggatgaaaaaaaagctcaaagatgagctagaagataag
aatactgttcaggagtatggctgtcctaactgccaaaggaaatataatgcgctggatgct
ctgagattaatttctatgctagacgattcttttcattgtgaaaattgcaatagcgaactt
gttgtggagtgtaacaagctaacttccgaagaagtagtagatggagatgataatggaagg
agatggcgccgggaaaaactaaaagatatgcttcagaagttggaggctcaattgaaacct
ctggtggatcaattagacagaataaaagatctacctattcctgaatttggatcttttctg
gcatgggaggctcgtgcagctatggctgctcgcgcaaatggtgatcttaaccctaatgat
cctttgaggtcacagggtgggtatggttcaacaccaatgccatttctcggagagacaaag
gttgaggttaaccttggcgacgggaacgaggatgttaaatctaaaggtggagattccagt
ctgaaagtcttgcctccatggatgattaagcaaggaatgaatctgactgaggaacaaaga
ggtgaaatgagacaagaagcaaaggttgatggtggttcaggaggagcagcaaaactttca
gatgacaagaaatcagccattggaaatggcgatgaaaaggatataaaggatgaatatctc
aaagcttactacgccgaactgctgaagcagcaagagcttgctgcaaggcttaatcaacaa
gaatccgctggtgaattaactcctgatattcaattggctactacatccccaggtcgcgag
gttggtaagaagtccaaacgtgaagaggatgatgttgaatgggaagaagaggctcctgtt
gcagcaaatggaaactacaaggtggacttgaatgtggaagcagaagcctcgggtggtgaa
gaagaagaggaagatgacgtcgactgggaagaaggctga
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