Entry |
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Name |
(RefSeq) probable pectate lyase 1
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KO |
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Organism |
csat Camelina sativa (false flax)
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Pathway |
csat00040 | Pentose and glucuronate interconversions |
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Brite |
KEGG Orthology (KO) [BR:csat00001]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104754610
Enzymes [BR:csat01000]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104754610
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
17:complement(1771580..1775732)
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AA seq |
432 aa
MAVLLPTWVLTMMCLLFFVGAMENTTHHKISSLPRSDETEWNQHAVTNPDEVADEVLALT
EMSLRNHTERRKLGYFTCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRF
YVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANV
HIANGGCITIQYVTNVIVHGLHIHDCRPTGNAMVRSSETHFGWRTMADGDAISIFGSSHV
WIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNH
FGVGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTK
RVDTPASHWKGWNWRSEGDLLQNGAYFTSSGAAASGSYARASSLSAKSSSLVGHITSDAG
ALPCRRGRQCSS |
NT seq |
1299 nt +upstreamnt +downstreamnt
atggcggttcttcttcccacatgggttttaacaatgatgtgtctactcttcttcgtcgga
gcaatggaaaacactactcaccacaagatctcatctctccctagatccgacgaaaccgag
tggaaccaacacgcagtgacgaatccagatgaagtagcggacgaagttctcgccttgact
gaaatgagtctgagaaaccataccgagaggaggaagctaggttactttacttgcggaaca
ggcaaccctatcgacgactgttggcggtgcgatcgcaactggcacaagaaccgcaaacgc
ttagcggactgcgggatcgggtttggaagaaacgccatcggtggtcgcgacggtcgtttc
tacgttgtcaccgacccgagggacgataatccggttaatcctcgaccggggacattacgt
cacgccgtgatccaagacagaccgttatggatcgttttcaaacgcgatatggtgattcag
ttgaaacaagagctcatcgttaacagcttcaaaacgatcgatggacgtggcgcaaacgtt
cacatcgctaacggcggttgcatcacgattcagtatgtaacgaacgtgatcgtccacgga
ttacatattcatgattgtagaccgactggtaacgctatggtgagaagctcagagacacat
tttgggtggaggacgatggcggatggtgatgctatttcgatctttggctcgagtcatgta
tggattgatcataactcattgtctcattgcgctgacgggctcgtggacgcagtcatgggc
tcaaccgcgattaccatctctaacaaccacttaactcaccacaacgaggtcatgttgctc
ggacatagcgattcgtacatgagggacaaagctatgcaagtgaccattgcttataatcat
tttggagtcggacttattcaaaggatgccgaggtgtcgacacgggtacttccacgtcgta
aacaacgactacactcactgggaaatgtacgcgattggtggaagcgcaaacccgacaatc
aatagtcaaggaaaccgatacgccgcccctaaaaacccctttgctaaagaggtgacgaag
agagtggacacaccggctagtcattggaaaggatggaactggagatcggaaggagatttg
cttcagaatggtgcttacttcacttcttcaggagccgctgcgtccggaagctatgcacgt
gcctctagtctctccgcgaaatcttcttcattggtcggacacattacttccgatgccgga
gctctaccttgtcgcagaggacgtcaatgttcatcatag |