Camelina sativa (false flax): 104754638
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Entry
104754638 CDS
T05044
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104754638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104754638
03036 Chromosome and associated proteins [BR:
csat03036
]
104754638
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104754638
Coactivators
SAGA/TFTC/STAGA complex
104754638
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104754638
STAGA complex
104754638
TFTC complex
104754638
SAGA complex
104754638
SLIK complex
104754638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
104754638
NCBI-ProteinID:
XP_019095147
LinkDB
All DBs
Position
17:complement(1898199..1902469)
Genome browser
AA seq
523 aa
AA seq
DB search
MSVVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD
VDGALNLRNVEPIYGFASGAPFRFRKAIGHRDLFYTDDREVDFKEVIEAPLPKAPLDTEI
VCHWLAIEGVQPAIPENAPLEVIRAPAENKPHEQKDGPLIDIRLPVKHVLSRELQLYFQK
IAELAMSKSNSALFKEALVSLASDSGLHPLVPYFTNFIADEVSRGLNDFQLLFNLMHTVR
SLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFTANLVALICKRYGTVY
ITLQSRLTKTLINALLDPKKALTQHYGAIQGLTALGHNVVRLLIVPNLEPYLRLLEPELD
AEKQKNQTKSYEAWRVYGALLRATGLCIHDRLKIFPPLPSPSPSFLHKGKGKIINTEPQK
RKLSVDSSDNRSPQKRLTTKDGPDGVQSQDHTGAAPMEVDNPVENDNQPQNSAQPSSSEQ
TSDANESESRNGMVKESGRGRAITMKAILDQIWKDDLDSGRLW
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgtacctaaggaaacggttgaggttatagctcaaagtattgggattaccaac
ttgttacctgaggctgctcttatgcttgctcctgatgttgagtatcgtgttcgtgagatc
atgcaggaagctattaaatgcatgcgtcactcaaagagaacgactttaactgcttcggat
gtagatggtgctctcaacttaaggaatgttgagccgatatatggctttgcctcaggagca
ccatttcgttttagaaaagctattgggcatcgggatctgttctacactgatgacagagaa
gtagattttaaagaggtgatcgaagccccactaccaaaagctccccttgatactgaaatt
gtttgtcactggctggctattgaaggagtgcaacccgctataccagaaaatgctccttta
gaagtcattagagcacctgcagaaaacaaaccccatgaacaaaaagacggacctcttatt
gacattaggttaccagtgaagcatgtactatctagggagcttcagctatacttccaaaag
attgctgaactggcaatgagcaagtcaaattctgctctgtttaaagaagcattagtgagc
ttggcctcagactcaggacttcatcctctggttccatattttacaaatttcattgcggat
gaggtttcacgtggtttaaatgacttccaactcctgtttaatctaatgcacactgttaga
agtcttctacagaatcctcacatacacatagagccttatctgcaccagttgatgccatct
gttgtaacatgccttgtatcaaggaagcttggaaatagatttgctgacaaccattgggaa
ctcagagattttacggccaatctggttgcactgatatgtaaaaggtatggaactgtctat
attactctccagtctcgtcttacaaaaactttaatcaatgcacttttggacccaaagaag
gctttgactcaacactatggtgcaattcaaggattaacagctttggggcacaatgttgta
cgccttcttattgtaccaaatcttgaaccgtatctaagacttctcgaaccggaattggat
gctgagaagcaaaagaatcagacgaagagctacgaagcgtggcgtgtatatggagctttg
ctgcgtgctacaggcttgtgtatacatgatcggcttaaaatcttccctcctttaccatcc
ccgtcaccaagtttcctccataagggaaagggaaagataatcaatactgagccccagaag
cggaagctgagtgtagactcttcagataaccgatcaccccagaaaagattaacaactaaa
gatgggccagacggtgtacaatcacaagatcacaccggcgcagctccaatggaagtagat
aatccagtggaaaatgacaatcagccacaaaactctgctcaaccatcatcgtcagaacaa
acttctgatgctaacgagtctgaaagcagaaatggaatggtgaaagaaagcggcaggggt
cgggctattaccatgaaagcaatccttgatcagatatggaaagatgatcttgattctgga
cggctttggtga
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