Camelina sativa (false flax): 104754694
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Entry
104754694 CDS
T05044
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104754694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104754694
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104754694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
DEAD
Motif
Other DBs
NCBI-GeneID:
104754694
NCBI-ProteinID:
XP_010475243
LinkDB
All DBs
Position
17:complement(2156597..2163593)
Genome browser
AA seq
1555 aa
AA seq
DB search
MEWIGKRVKSRSRQRLQVVNKRKKTEVEAPVISPPKKRRPRRIKDPDSDVEDITPTYHNS
VPPPVQENDRYSAGLRAGSVQNNSVKESFSRIIRDLNVEKSGPSSSRFRDGSEQHTSVKE
TSFRVSDLDVGKNSVPSSFGFRDVSEQNTCVKEKCSPEIGDLNVEKSGPSSSKLRDLSEP
NTCVKEKCSPEIGDMDAEKSGPSSPKLRDVSEQNTCVKEKCSPETGDLDVEKSGSSSSKL
RDVSEQNTCVKEKCSPEIGDLDVEKSGPSSSKLRDVSEQHTCVNEKFSPEITNLDVGISV
PSSSKLREVSERNKYVMDMCSPEARGLVVVKPVPAEIEILSDSESEIGARASARKKLFED
TSRIVESLSDGNSTSETEGDEEENAESPDNNTKDDITVHSLSSEDPSSSSSSSSSSSSSS
SSSSSSSSSSSSSDGEFNLKEVVRDNTDDDDFLKVSLPVRNVSIAERKPLVRYKRSGTGL
TKPRKEDKKIRRLNHREEEKEEERDEVVEVVIKQPSNPVFTCTHCGKENTGVLESPSSFM
RPLALRDEIEDVKYFASTIASKYEDSIFINSGKSPEKPSRPELENPETGKEVKTLENPST
SRPEVFTSEKAKEVQARERSSTYRPEILSPEVFTSEKAKEVQARERSSTYRPEILSSVKA
KEVVQALEKPSRPEIQNLEKAKEVQAINRLGSVIPAVAVAGGLNKSVLANEPIDNESDSS
ISSADKSGYESDPSLKDKEIKTNNNSDWRVLSGNHREVDLFRLLVNSVREKGQLDEGYEE
AEELVSSPEDQFQEQGNEDLRKYDDDGLLIIRPPPLIEKFGMLEPPSPPEISESELELQM
LWEELAFCSKSNDVSNELPSNMEEILIDETPAAQCKKGNHNLFLDLEVGLKCMNCGFVER
EIRSMDESEWGEKITRERRRCDRFDEEENSNILGRLGFEGPNTNSLHEDCVSSEGTVWDK
IPGVKSQMYPHQQEGFEFIWRNLAGTIMLNELKEFENSEETGGCIMSHAPGTGKTRLTII
FLQAYLACFPDCKPVIIAPASLLLTWAEEFKKWNISIPFHNLSSLEFTGKENSAALGLLM
KKNATARTKNEIRMVKIYSWIKAKSILGISYNLYEKLAGVKDEDKKTKMVREVKPDKELD
DIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFQELCNVLG
LARPKYLEKLTSTLKKSGMTVTKRGKRALGNEINNRGIEELKAVMLPFVHVHKGSILQRS
LPGLRECVVVLNPPELQKRVLESIEVTHNRKTKNVFETEHKLSLVSVHPSLVSRCKLSEK
ERLSIDETLLAQLKKVRLDPKQSVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIMKHL
VSRFNWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRV
ILLDVVWNPAVERQAISRAYRIGQQRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVFAC
SSRPDKGKEKIAEAVTEDKVLDTMVQRSKLGDMFDNLIIQPKEADLVEGFNILMP
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggagtggattgggaagagagttaagtcccggagcaggcagcgtcttcaggtggttaat
aagcggaagaagacggaggtagaagctcctgtgatatctcctccaaagaaacgaaggccg
agaagaataaaagaccccgattctgacgttgaggacatcacacctacttaccacaacagt
gttcctcctcctgttcaagaaaatgacaggtactctgctggtttaagggctgggtctgtt
cagaacaactctgtgaaggagagtttctctaggattattagggatctgaatgtggagaaa
tcaggtcctagctcctctaggttcagagatgggtctgaacagcacacgtctgtgaaagag
acttcttttagggttagtgatttggatgtggggaagaactcagttcctagctcttttggg
ttcagagatgtgtctgaacagaacacatgtgtaaaggagaagtgttcccctgagattgga
gatttgaatgtggagaaatcaggtccgagctcctctaagctaagagatttgtctgaaccg
aacacatgtgtgaaggagaagtgttcccctgagattggagatatggatgcggagaaatca
ggtccgagctcccctaagttaagagatgtgtctgaacagaacacatgtgtgaaggagaag
tgttcccctgagactggagatttggatgtggagaaatcaggttcgagctcctctaaacta
agagatgtgtctgaacagaacacatgtgtgaaggagaagtgttcccctgagattggagat
ttggatgtggagaaatcaggtccgagctcctccaagttaagagatgtgtctgaacagcac
acatgtgtgaatgagaagttttctcctgagattacaaatttggatgttggaatatcagtt
ccgagctcttctaagttaagagaggtgtctgaacggaacaaatatgtgatggatatgtgt
tcccctgaggctagaggtttggttgttgtaaaaccagtccctgctgaaatagagattctt
tcagattctgagtctgaaattggagccagagcttcagccaggaagaagctttttgaggac
actagcagaatcgtagaatctctcagtgatggtaatagcacaagtgaaactgagggagat
gaagaagaaaatgcagagagtccagacaataacaccaaagatgatataacagtccactcc
ctgtcttcggaggatccatcttcttcatcatcatcatcatcatcatcatcatcatcatca
tcatcgtcctcatcttcatcttcatcttcttcctcgagtgacggtgaattcaatttaaag
gaggtggttagagataatacagatgatgatgatttcttaaaggtcagtttaccagtcagg
aatgtctctatagcggaaaggaagcctttggtaaggtataagaggtctggtactggctta
accaagcctagaaaagaggacaagaagattcggagattaaaccatcgagaagaagaaaaa
gaagaagaacgagatgaagtagttgaagtagtaataaagcagccaagcaacccggtgttc
acttgtactcactgtggcaaagagaacacaggagtccttgaatctcccagctctttcatg
agaccacttgcattaagagatgaaattgaggatgtgaaatactttgcttctactattgca
tcaaagtatgaagattctattttcattaactctgggaaatcacctgaaaaaccatccaga
cctgagttggagaatccagagacgggaaaagaagtgaaaacacttgagaatccatccaca
tccaggcctgaagttttcacttcagagaaagctaaagaggtacaagcacgtgaaaggtca
tctacttacagacctgaaattctcagtcctgaagttttcacttcagagaaagctaaagag
gtacaagcacgtgaaaggtcatctacttacagacctgaaattctcagctcagtaaaagca
aaagaggtggtgcaagcacttgaaaagccatcaagacctgaaatccagaatttagagaaa
gcaaaagaggtccaagccatcaacaggttggggtcggtgatacctgcagttgcagttgca
gggggattaaataagtctgttttggctaatgaaccaattgataatgagtctgattcttct
atcagctctgcagataaatctggatatgaatctgatccttctctaaaagacaaagaaatc
aagactaataacaactcggattggagagtgctaagtggaaaccatagagaagttgatctc
ttcaggctgcttgtgaactctgttagggagaaaggtcaactagacgaaggatatgaagaa
gcagaagaactagtttcttcacctgaagaccagtttcaagaacaaggaaatgaagatcta
cgaaaatatgatgatgatggacttctaatcattaggccaccaccattgatagagaaattt
ggtatgctggaacctccatcaccacctgagatttctgagtcagaattagagttacagatg
ctgtgggaagaactagcattttgcagtaaatctaacgacgtcagcaacgagcttccttca
aatatggaagaaatattaattgatgaaactccagcagcacaatgtaaaaaagggaatcac
aatctgtttcttgatctggaggttggtttgaagtgtatgaactgcggctttgtggagaga
gaaatccgaagcatggatgaatctgagtggggagagaagatcacaagggaaaggagaaga
tgtgatagatttgacgaggaagaaaatagcaacatccttgggagacttgggtttgaaggt
cctaacacgaacagcttacatgaggattgtgtttcttctgaaggaaccgtttgggataag
atcccaggggtcaaatctcaaatgtatcctcaccagcaagagggttttgagtttatttgg
aggaacttagctggtacaatcatgttgaacgagctcaaggaatttgagaatagcgaagaa
accggaggatgcatcatgtcacacgctcccgggacaggaaaaactcgcctgaccatcatt
ttcctgcaagcctacctagcatgcttcccagattgcaaaccagtgatcattgctcctgca
agcttgcttctcacgtgggcagaggagtttaagaaatggaacataagcattccctttcat
aatctcagcagtttggaatttactggaaaagagaactctgcggcgctgggacttttgatg
aagaagaatgccactgctagaaccaaaaatgagataaggatggtgaaaatatactcttgg
ataaaagcaaagagtatactcgggatcagctacaacctctatgagaagcttgcaggagtt
aaagacgaggacaaaaagacaaagatggtgagagaagtgaaaccagacaaagaattagat
gatatcagagagatacttatgggaaggcctggactgctggttcttgatgaggcgcacacg
cctagaaaccagagaagttgtatctggaaaacactatctaaagtggaaacacagaaacgt
atcttgctttctggaactcctttccagaacaacttccaggagctgtgcaatgttctggga
ctcgcaagacctaaatatctggagaagctcacatccacactcaagaagagtgggatgact
gtaactaaaagaggaaaaagagctttggggaacgaaatcaacaaccgtgggatcgaagag
ttgaaggctgttatgcttccatttgtgcatgtccataaaggaagcattcttcaaaggagc
ctccctggtttgagagaatgcgttgtggtgttaaacccacctgagctgcagaagagagtc
ctagaatccattgaagtcactcacaaccggaaaacaaaaaacgtgtttgaaacagaacac
aagctgtctctggtctcagtccatccttctctagtctctcgctgcaaactctctgagaag
gaacgtttgtccatcgacgagactttgcttgcacagcttaagaaggtaagactcgatcca
aagcaaagtgtgaaaacgagattcctcatggagttcgttgagttatgcgaggtgataaag
gagaaagtgttggtcttcagccaatacatagacccattgaaactgatcatgaaacatctg
gtctctcgtttcaactggaacccaggggaggaagtgttgtacatgcatggcaagctcgag
cagaaacagcgacaaaccttgatcaacgaattcaatgatccaaaatccaaggcaaaagtg
ttcttagcttcaacaaaagcctgctctgaagggatcagtcttgtaggagcgtcaagggtg
attcttttggatgttgtgtggaatccggcagtcgaaagacaagctataagccgtgcttac
agaatcggtcagcagagaattgtttacacatatcacttggttgcaaaaggaactcctgag
gggccaaagtactgcaagcaagcacagaaggatagaatctcagagctagtgtttgcatgc
tcgtccagacctgacaaaggaaaggagaagatcgctgaagctgtgacagaggataaagtg
ttggatactatggtgcagcgttcgaagcttggggatatgtttgacaaccttataatccaa
ccgaaggaagcagatttggttgaaggtttcaacatacttatgccatga
DBGET
integrated database retrieval system
