Camelina sativa (false flax): 104754903
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Entry
104754903 CDS
T05044
Name
(RefSeq) zinc finger CCCH domain-containing protein 4
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104754903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104754903
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19-related factors
104754903
Complex C
104754903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
RRM_occluded
zf-CCCH_10
RRM_3
zf-CCCH_3
zf-CCCH
zf-CCCH_4
RRM_YTH1
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
104754903
NCBI-ProteinID:
XP_010475494
UniProt:
A0ABM0WSE2
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All DBs
Position
17:complement(2929808..2932287)
Genome browser
AA seq
484 aa
AA seq
DB search
MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR
DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAE
EHDRKTRAGLDYESSFGKMRPNDTILKLQRTTPYYKRNRAHVCSFFIRGECTRGAECPYR
HEMPETGELSQQNIKDRYYGVNDPVAMKLLGKAGEMGTLESPDDESIKTLYVGGLNSRIL
EQDIRDQFYAYGEIESIRILADKACAFVTYTSREGAEKAAQELANRLVVNGQRLKLTWGR
PRPEQDGSNQQGSVAHSGLLPRAVISQQHNQPPPMQQYYMHPPQANQDKPYYPSMDPQRM
GAVISNQEAGGSSTTDNSGASSSSYMMPPHQSYPPAPYGYMPPPYQQQYSPNHHHHPGPM
QHYAPPPAAYPYPEQPGPGSRPAPSPAAVSAPSPDSAPAGSAGAPAGSSQQPPAAASTAT
GSSE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctcacaggatactgagagatcatgaagccgatggatgggagcgctccgatttccca
atcatctgcgaatcttgtctcggtgacaacccctacgtgcgaatgactaaagcgaattac
gataaggaatgcaagatatgtacgcgacctttcacggtgtttaggtggagacctggccgt
gatgctagatacaagaagactgaaatttgtcagacttgttgcaagctgaaaaatgtgtgc
caagtttgtcttctggatcttgagtatggtcttccagttcaggtcagggacacagcactc
aacattagtactcatgactctatccctaaaagtgatgtcaacagagagtactttgctgaa
gagcacgacaggaagactagagctggactggattatgaatcctcattcgggaagatgcgg
cctaatgatactattttaaagcttcaaagaacaacgccgtactataaaaggaatagagca
catgtttgtagtttcttcatcaggggtgagtgtacaagaggtgccgagtgtccataccgg
catgagatgccagaaacaggagagctatcccagcaaaacattaaagaccgttattatggt
gttaatgatccagttgctatgaagttacttggaaaagccggtgagatgggcactttggaa
tcaccagatgatgaaagcatcaaaacgctttacgtcggtggactgaactcaagaatcctg
gagcaagacatacgggaccaattctacgcctatggtgaaatcgaatctatcagaatcttg
gctgacaaagcctgtgcatttgtcacatacacatcccgtgaaggtgcagagaaggctgca
caagagctcgccaacaggctagtcgtcaacggtcagaggctaaaactcacatggggaaga
cccagacctgagcaagatggttccaaccaacagggcagtgtggctcatagtggtttacta
cctcgagcagttatatctcagcagcacaatcagcccccaccaatgcagcagtactatatg
cacccaccacaagctaaccaagacaaaccttactacccatcaatggacccacagagaatg
ggtgcagtcatttcaaatcaagaggctggtggttcaagcaccactgacaacagcggagct
tcatcttcttcttacatgatgcctccacaccagtcatacccaccagcaccatatggatat
atgccaccgccttaccagcagcagtattctcctaaccatcatcatcaccctggtcctatg
cagcactatgccccgcctccagcagcttacccgtacccagagcaacctggtcctggatca
agacctgcaccatctccagccgcggtctctgctccatcacctgattctgcacctgctggg
tctgcaggagcacctgcaggatcctcccaacaacctcctgctgctgcttctactgcaact
ggttcgtctgaatag
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