Camelina sativa (false flax): 104755043
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Entry
104755043 CDS
T05044
Name
(RefSeq) protein CHROMATIN REMODELING 20-like
KO
K10779
transcriptional regulator ATRX
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104755043
03036 Chromosome and associated proteins [BR:
csat03036
]
104755043
Transcription factors [BR:
csat03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
104755043
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104755043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
DacZ_P
Motif
Other DBs
NCBI-GeneID:
104755043
NCBI-ProteinID:
XP_010475667
UniProt:
A0ABM1R7R1
LinkDB
All DBs
Position
17:3476879..3487263
Genome browser
AA seq
1458 aa
AA seq
DB search
MEPNEGKGKDQGEKPVEATDDVMDITDEIMEVDQEMMEAKLEEVKARDERGEHIDVQMEE
NNNQDGQQDEATDSISESSELCSEEDEQFLLGPDDDLVHEKPLSEEEIEELISDFLGVES
KAADAQEALEKESLSNVESEVRKELSQTLSGEELNEAVAAEMMTFKDEWEATLDELETES
ANLLEQLDGAGIELPKLYEMIESQAPNGCHTEAWKQRAHWVGTQVTKETVESLGNAERFL
HTHRPVRKRHGKLLEEGASGFLEKKLADGAAKESLAGTSELDWSSLNKVFSEKRDESISF
GSKDWASVYLASTPQQAAAMGLEFPGVNEVEEIEEIDAGLADPFLADAIENERELPLSEE
QKKNYIRVREEDDLNSDRELQLHLKRKRRYKRSKQVIRCAAENMDDDCEYLNGNYIAQSS
GEDRVKIPETSTQVHNNEVNKVDNGNLSNSDVDAMRDDSHNSANRFRCTACNNVAVEVHT
HPLLEVIVCMDCKRSIEDRVAKVEDSLERSCEWCGHITDLIDCRTCEKLFCASCIKRNIG
EEYLSEAQSSGWDCCCCSPMPLQRLTLELEKAIRDKKSVELSSDSSSDSSSDSSSDNNSA
DVNVAISSKKKSKKRIRRIIDDAELGKDTRRKIAIEKERQERLRSLQFSSRYKTISSMGD
LKSIPEGAEVEVLGDAHSGYIVNVAREIGEGAVRVPCSISAKLKVHQVTGIRFMWENIIQ
SISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRS
EFMKWMPSEVKPLRIFMLEDVSRERRLDLLKKWRNKGGVFLMGYAAFRNLSLGRGVKDVN
AAREICSALRDGPDILVCDEAHIIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC
MVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDM
NVVKKDLPPKTVFVISVKLSPLQRKLYQRFLRLYGFSDGRADERMNKNFFAAYQVLAQIL
NHPGIPQLRREDSKNGRRGSIVDIPDDCSSEENTDYNMVTGEKERTMNDLQDKVDGYLQK
DWWVDLLQKNNYKVAEYSGKMILLLDILSMCADVGDKALVFSQSIPTLDLIELYLSRVPR
HGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAA
NRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARV
VDRQQVHRTISKEEMLHLFEFDDDDEKSDTVTELSKQNEVAQCNLVENSQKQKATLPRVG
CDKLMESLLQRHGPDWISNFHEHETLLQENEEERLTKEEKDMAWEVYRRALEWEEVQRVP
LSESPVLPKPSPSVQEPVRMPKLFNRSRFVNRNCTRTAHQLTLISQGIRVGFSTFCGECG
RVLTWADVLPASKLSEVN
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaatgaaggaaaagggaaggatcaaggtgaaaagccagtggaggcaacagat
gatgtgatggatataacagacgaaataatggaggtagaccaggagatgatggaggcaaag
cttgaagaggtgaaagctagagatgaaagaggggagcacattgatgtgcagatggaagaa
aataacaatcaggatgggcaacaagatgaagccactgatagtatatcggaaagttctgaa
ctctgttcagaagaagatgaacaatttctgttgggaccagatgatgacttggttcatgag
aaacctctgagcgaggaagaaatagaagagttaatttcagattttttgggagttgagagt
aaggctgcagatgctcaagaagcacttgaaaaggagtctctttctaatgtagagagtgaa
gttaggaaggaattatcacaaacactcagtggtgaagagttgaatgaagctgttgctgct
gaaatgatgacttttaaagatgaatgggaggcaactcttgatgagcttgaaacagaaagc
gcaaacctgttggagcaacttgatggtgcgggaattgagcttccaaaattgtatgaaatg
atagaaagtcaagcccctaatggttgccacactgaagcttggaaacaaagagcccactgg
gttgggactcaggtgacaaaagaaacggtggaatcattgggtaacgctgagaggtttctt
cacactcaccggcctgtccgaaaacgacacggaaaacttttggaggagggagctagtggt
tttctggagaaaaagcttgctgatggtgctgccaaagaatctctagctggaacatctgaa
cttgactggtcgtctctaaacaaagttttttcggaaaaaagggatgagtctatttccttt
ggtagtaaggattgggcgtctgtttacttggcaagcactccacaacaagctgcagccatg
ggattagaatttccaggagtcaatgaggtagaggaaattgaagagattgatgcaggcttg
gcagatccatttttggccgatgcaatagaaaatgaaagagaacttcccctttctgaagaa
caaaagaaaaattatataagggtcagagaagaggatgatttaaatagtgatcgtgaactt
caacttcatttgaaacggaagagacgctataaaagatctaaacaggttatcaggtgtgcg
gcagagaatatggatgatgactgtgagtacttgaatgggaattatattgcccaaagttct
ggtgaagatcgagtaaaaattcctgagaccagcactcaagttcataacaatgaagtcaac
aaagtggacaacgggaatttgtctaattcagatgttgatgccatgagagatgattcacat
aattcagcaaacaggtttaggtgtactgcctgtaacaacgtagctgtggaagtgcatact
cacccccttttagaagtaatagtttgcatggattgtaaacgttcaattgaagatagagtt
gcgaaggttgaagactctttggaacgtagttgtgaatggtgtggtcatattactgactta
atagattgtagaacatgcgaaaaacttttctgtgcctcgtgtataaagaggaatatcggt
gaagaatacttgtctgaagctcaatcctctggttgggattgttgttgctgctctccaatg
cccttgcaaagattgacactagaactggagaaagccattagggataagaagtcagtagag
ttgagttctgattccagctctgattctagctctgattccagctctgataacaattctgct
gatgttaatgtagcaatcagctcaaagaagaaatcaaaaaagagaattcggcggataatt
gatgatgctgaactagggaaagatacgagaagaaaaattgcaattgaaaaggaacggcag
gagcgtcttaggtccttgcagttttcgtccagatacaaaacaattagctctatgggagac
ctgaaatctattccagaaggtgcggaagttgaggttcttggtgatgctcacagtggttac
atagtgaatgtggctagggagattggtgaaggagctgtgagagttccttgtagcatatct
gccaaactaaaagtccatcaggtaaccgggattagatttatgtgggaaaatattattcag
tctatcagcagagtaaagtcaggtgataaaggccttggctgcattctagctcatacaatg
ggcctgggcaaaacttttcaggttatagcgttcctgtacaccgcaatgagatgtgttgat
ttggggttgaaaactgctcttattgtgactcctgtaaatgtgttgcacaattggcgaagt
gaattcatgaagtggatgccatcagaagtgaaaccacttcgcattttcatgcttgaagat
gtttcaagggagaggagattggacttgctaaaaaagtggcgaaataaggggggagttttc
ttgatgggatatgcagcttttagaaacctgtctcttgggaggggggtgaaggatgtgaat
gcggccagagagatctgtagtgccttgagggatggacctgatatacttgtttgcgatgag
gctcacattattaagaacaccagggctgacacaacgcaagctttgaagcaagttaaatgc
cagagaagaattgccttaactgggtcaccccttcaaaacaatctcatggaatattattgt
atggttgattttgtcagagaaggattcttggggagtagtcctgagtttagaaatcgcttc
caaaatccaatagaaaacggacagcatatgaattctactgcggaggatgtaaaaattatg
aaccagagatcacacattctgtatgagcaattgaaaggatttgtgcaaagaatggacatg
aatgtggtgaaaaaggatctgccacctaaaacagtcttcgtaatatctgtcaagctatcg
cccttgcagcggaaattgtatcagagatttcttaggttatatgggttcagcgatggaaga
gcagatgaaagaatgaataaaaacttttttgctgcttaccaggtcttggctcagatttta
aatcatccagggattccgcaattaagaagagaggatagcaagaatggtcgtcgtggtagc
attgttgatattccagatgactgttcaagtgaagaaaatacagactacaacatggttacg
ggagagaaagaaagaactatgaatgatttgcaagataaagttgatggctacctccagaag
gattggtgggtcgacctacttcaaaaaaataattataaggtggcggagtatagcggcaaa
atgattttgctattggatattttatccatgtgtgctgatgtgggggataaggcgcttgtg
tttagccagagtatcccgacactggatctcatagaactatatctttcaagagtacctcgg
catggaaaacaaggaaagttctggaaaaagggaaaagactggtacagaattgatggaaaa
actgaaagctcagaacggcagaagttggttgataggtttaatgagcctgataacaaaagg
gtgaaatgcactctaatatcaaccagagcgggatcgcttggaattaatctttatgctgct
aaccgtgtgatcatagttgatggttcatggaatccaacctatgatcttcaagctatattt
cgagcatggaggtatggtcaaaagaaaccagtatttgcatacaggttgatggcacgtggg
actattgaagaaaagatatataaacgtcaggtgaccaaggaggggctagctgcgagagtg
gtggatagacaacaagttcacaggactatctccaaagaagagatgttacacctttttgaa
ttcgacgacgacgatgagaaatctgacaccgtaaccgagttaagcaagcaaaatgaagtg
gctcaatgcaatctggtggagaattcacagaaacagaaggccactttacctcgtgttggc
tgtgacaaattgatggagagcttgctacaaagacacgggccagactggatttccaatttc
catgagcacgagacattgttacaagagaatgaagaggaaagactgacaaaggaagaaaaa
gacatggcctgggaagtttacaggagagcgcttgaatgggaagaagttcagcgggtacca
cttagcgaatctccagtgctcccaaaaccttctccttctgtacaagaacccgtacgcatg
ccaaagttgttcaacagaagtcgttttgtgaaccgtaactgcaccagaactgctcaccag
cttactctcataagccaaggaataagagtggggtttagcacgttctgtggggagtgtggg
cgcgtgttaacatgggcagacgttttacctgcctctaaactttcagaggtaaactaa
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