Camelina sativa (false flax): 104755096
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Entry
104755096 CDS
T05044
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37b isoform X1
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
5.6.1.10
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03060
Protein export
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
104755096
04141 Protein processing in endoplasmic reticulum
104755096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
csat03110
]
104755096
04131 Membrane trafficking [BR:
csat04131
]
104755096
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104755096
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.10 non-chaperonin molecular chaperone ATPase
104755096
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP70 / DNAK
104755096
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
104755096
Autophagy
ER-phagy
ER stress-related proteins
104755096
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104755096
Exosomal proteins of other body fluids (saliva and urine)
104755096
Exosomal proteins of colorectal cancer cells
104755096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
ParM_N
EPS8_2nd
DUF7357
Hydantoinase_A
FtsA
Motif
Other DBs
NCBI-GeneID:
104755096
NCBI-ProteinID:
XP_010475731
UniProt:
A0ABM0WT07
LinkDB
All DBs
Position
17:complement(3720491..3723180)
Genome browser
AA seq
666 aa
AA seq
DB search
MNLMKNNRTNMTNKALVYLVFLTAALMSIVAIEAEEQKIGTVIGIDLGTTYSCVGVYHNK
HVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAAKNPERTVFDPKRLMGRKFDDPDVQ
RDIKFLPYKVVNKDGKPYIQVKVKGEDKVFSPEEISAMILTKMKETAEAFLGKKIKDAVI
TVPAYFNDAQRQATKDAGAIAGLNVVRIINEPTGAAIAYGLDKKDGESNILVYDLGGGTF
DVSILTIDNGVFEVLSTSGDTHLGGEDFDHRVMDYFIKLVKKKYNKDISKDHKALGKLRR
ECELAKRALSNQHQVRVEIESLFDGVDFSEPLTKARFEELNMDLFKKTLEPVKKALEDAK
LKKSQIDEIVLVGGSTRIPKIQQLLKDFFDGKEPNKGTNPDEAVAYGAAVQGGVLSGEGG
EETQNILLLDVSPLSLGIETVGGVMTNIIPRNTAIPTRKSKVFTTYEDQQTTVTIRVYEG
ERSMTKDNRELGKFDLTGIIPAPRGVPQIEVTFEVDANGILQVKAEDKVAKASQSITITN
DKGRLTEEEIEKMVREAEEFAEEDRIVREKIDARNKLETYVYNMKSTVEDKEKLAEKISD
EDKEKMEEVLKETLEWLDENVNAEKEDYDEKMKEVESVCNPVIKSAYEKTGEESKDDDED
DDLHEL
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttatgaagaacaacagaacgaatatgacgaacaaagctctcgtgtatttggtt
tttctgacagcagctttgatgtcaattgtggcaatagaagccgaagagcagaaaatcgga
acggtgatagggatcgatctcgggactacgtattcatgtgttggtgtgtatcataacaaa
cacgtggaaatcatagcaaacgatcagggaaacagaattacaccatcttgggttgcgttt
actgataccgaacgtctcatcggagaagctgctaagaatcaagcggccaagaaccctgag
cggaccgtcttcgaccccaaacgtctgatgggaagaaaatttgatgatcctgatgttcaa
agggatatcaaattcttgccatacaaggttgtgaacaaagatggaaagccttatattcag
gtaaaggttaaaggtgaagataaagtgtttagccctgaggagattagtgctatgatccta
actaagatgaaggagacagctgaagctttcttgggaaagaagatcaaagatgctgtcatc
acggttccagcgtattttaatgatgcgcagaggcaagccacaaaggatgcgggagcgatt
gcggggcttaacgtggttcgtataatcaatgagccaacaggtgcagccatagcttatggt
ttagacaagaaagatggggagtcaaacattctcgtatatgatcttggaggtggaacattt
gatgttagtatccttaccatagacaatggagtctttgaagtcttatccacaagtggagac
actcaccttggtggagaagattttgaccacagagtgatggactacttcatcaaactggtc
aagaagaagtataacaaagacataagcaaggatcacaaagcccttggtaaacttaggcgt
gaatgtgagcttgcgaaacgagctttgagcaaccagcaccaagtccgtgttgaaatcgag
tcactctttgatggagttgatttctctgagcctttaacaaaagcgagattcgaggaactc
aacatggatttattcaagaagacgctggagccagtgaagaaggctcttgaagatgcgaag
ttgaagaaatcccaaatcgacgagattgttcttgttggaggaagcactcgaatcccaaaa
atccagcagttgttaaaggatttctttgacggcaaggaacctaacaaagggactaaccct
gatgaggctgtggcctatggcgctgcggtccaaggtggagtgttaagtggtgaaggtgga
gaagaaacacaaaatatcttgctgcttgatgtttcacctttgagcctcggtattgaaact
gtgggaggcgtgatgacaaacatcattccaaggaacacggcgatcccaacgagaaagtct
aaagtgttcacgacttatgaagatcagcaaactactgtgaccatcagagtctacgaaggc
gagagaagcatgactaaagataaccgcgagctcggaaaattcgatctcactggcattatt
cctgcacccaggggagtgccacagattgaggtgactttcgaagtggacgcaaatggaatt
ctacaggtgaaggccgaagacaaggttgcaaaggcgtcacaatcgattacaataacgaac
gataaaggtcgtttgacagaagaagagattgagaaaatggttagagaagcagaggagttt
gctgaggaagataggattgtgagggagaagattgatgcgaggaacaagcttgaaacgtat
gtgtacaacatgaagagtacagtggaagataaagagaagcttgcagagaagataagtgat
gaagataaagagaaaatggaagaggttttgaaggaaactttggagtggttagatgagaat
gtgaatgcagagaaggaagattacgatgagaaaatgaaggaggtggagtcggtttgtaat
ccggttatcaagtcggcttacgagaaaaccggtgaagagagtaaagacgacgatgaagat
gatgatcttcatgagttatag
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